Entry |
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Name |
(RefSeq) protein RDM16-like isoform X1
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KO |
K12843 | U4/U6 small nuclear ribonucleoprotein PRP3 |
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Organism |
vun Vigna unguiculata (cowpea)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:vun00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114172970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:vun03041]
114172970
Spliceosome [BR:vun03041]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
114172970
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
2:32613818..32618988
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AA seq |
862 aa
MDNRAKSEKRSKDRHLERDDKYHRDSKDHHNHRSDSNHKRDHKSRDNDRDRNYERDGNKD
RGRTYDREGSKDRGKTYDREGSRDRDRVHDSEGSKDKDKAYERESGKDRSKVKRDDGRED
LVESRYSSHSHKRKEREHSEDRDFEDKKIKVSEERKEGKRERRKFGDKVKKEEEEDGDDN
NIRGIHEAKVKEEDTEGAHGSASSKDTVFVQNGALGSLAVAPMSVFETSLAPPPPFPIKV
SLNSTTNENKGVSITRSHEVTGKSSTDGSSSTAGKAGSLSIDALAKAKKALQMQKELSEK
LKKIPQLNKSSTQNSHGSSNLGSNSESASAVMPKGSSSASFGHVANMSIFPSATPPASGT
SAAGIANATLPNLEAVRRAQELAARMGFRQDPQFAPLINMFPGQMVTDVAILQKPTKAPV
LRLDAQGREIDEHGNVISVTKPVNLSTLKVNINKQKKEAFEILQPVLDVDPESNPYFDES
MGINKTKILRPKRMSFQFVEEGKWSRDAETIKLKSKFGEAQAKEHKAKQAQLAKAKAAPD
INPNLIEITERVVIKEKPKDQIPDIEWWDLPLVHSGNYGDIDNETIAEDKVKIENITFLV
HHPRPIEPPAEPTPPPPQPLKLTKQEQKKLRTQRRIAKEKDRQEMIRQGVIEPPKPKVKI
SNLMKVLGSEATQDPTRLEKEVRSAAAEREQAHIDRNIARKLTPAELREKKERKLFDDPN
TVETIVSLYRINDLSHPKARFRVDVNAQENRLSGRAVICDGISVVVVEGGSKSIKRYGKL
MLRRINWSDFSKEKEENEDSEDDEKPANKCVLVWQGSVAKPNFNRFSVHDCITEAAARKV
FVDAGVPHYWDQAINYVEDEAV |
NT seq |
2589 nt +upstreamnt +downstreamnt
atggacaatagagcgaaatctgaaaaaagaagtaaagatcgacacctggaacgtgatgac
aaataccatcgtgattccaaagaccaccacaatcatcgatcagattcgaatcacaagcgt
gaccacaaatccagggataacgatagggataggaattatgaaagagatggaaacaaggac
aggggtaggacttatgatagagaaggaagcaaggataggggtaagacttatgacagagaa
ggaagcagggatagggatagggttcatgacagtgaaggaagcaaggataaggacaaggct
tacgaaagagagagtggcaaagataggtcaaaggtgaagcgtgatgatggtagggaagat
ttggtggagtcacgatactcctcacattctcataagcggaaagagagggagcacagtgag
gacagagactttgaggacaagaaaattaaggtttctgaggagaggaaggaaggaaagagg
gaacggaggaaatttggtgataaagtcaagaaggaggaagaagaagatggtgatgataat
aatattagaggcattcatgaggccaaggttaaggaggaagacactgaaggtgcccatggt
tcagcttcttccaaagacactgtatttgtccaaaacggtgccttgggatcacttgctgtg
gcgcccatgagtgtgtttgagacatctttagctcctcctcctccatttcctatcaaggta
tctttgaattctaccacaaatgaaaataagggcgttagtattaccaggtctcatgaggtt
actggaaaatctagtacagatgggtcatcttcaactgctggaaaagctggaagcctgtcg
attgatgctttagctaaggctaagaaagccttacaaatgcagaaagagttgtcagaaaag
ctgaagaaaattcctcagttgaacaagagttctacccaaaattcacatggaagctcaaac
ttgggttcaaacagtgaatctgcctctgcagtcatgccaaaaggttccagctcagcttct
tttggccatgttgcaaatatgtcaattttcccctctgctactcctccagcaagtggcact
agtgctgctggtattgcaaatgcaactcttcccaacttggaagctgtcaggcgggctcag
gagcttgctgcaaggatgggatttcgtcaagatccacaatttgctcctctgataaatatg
tttcctggtcagatggtaacagatgttgctattctgcaaaaaccaacaaaggcccctgtt
cttcgacttgatgctcaagggagggaaatagatgaacatggaaatgttattagtgtgacc
aagcccgtcaaccttagcacattaaaggtcaacattaacaaacaaaagaaggaagcattt
gaaatactgcaacctgtgttggatgttgatcctgaatcaaatccttattttgatgaaagt
atgggtatcaacaaaacaaagatcctgcgacccaagaggatgagtttccaatttgtggag
gaaggaaaatggtcaagagatgctgaaacaataaaattgaagagtaaatttggagaagct
caagcaaaagagcacaaggccaaacaagcacagttggcaaaggcaaaggctgctcctgat
atcaatcccaacttaatagaaataacagagagagttgtaattaaagaaaaacccaaggac
caaattccagacatcgagtggtgggacctgcctcttgtgcattctggaaactatggagac
attgataacgaaaccatagctgaggataaggtgaaaatagaaaatatcactttccttgtg
catcatccgcgtcctattgaaccacctgccgaacccactcctccaccacctcaaccgctg
aaactaaccaagcaagagcagaagaaactccggacacaaaggcgaatagcgaaggagaaa
gatcgacaagagatgataagacagggtgtgatagaaccaccaaaaccaaaggtcaagatt
agcaatttaatgaaagtacttggctctgaagcaactcaagatcctacccggctggaaaag
gaggtacgcagtgcagccgccgagcgtgagcaggctcacatagataggaacattgcacgc
aagcttactccggcggagctccgggaaaagaaggagagaaagctgtttgatgacccaaat
acagtggagacaattgtgtctctctacagaatcaatgacctctcacatccaaaggcccgt
ttcagagttgatgttaatgctcaagagaaccgtttgagtggacgtgctgtgatttgtgat
ggtatcagtgttgttgttgttgaaggtggaagcaagtcgattaagaggtatgggaaactt
atgcttagacgcattaattggagtgatttttcaaaagagaaagaagaaaatgaagattca
gaagatgatgaaaagcctgccaacaagtgtgttctggtgtggcaaggaagtgttgcaaaa
cccaacttcaataggttcagtgttcatgattgcatcactgaagcagctgccagaaaagtt
tttgtggatgccggtgttcctcattattgggaccaagccatcaactacgtagaagatgaa
gctgtttga |