KEGG   Vigna unguiculata (cowpea): 114172970
Entry
114172970         CDS       T06017                                 
Name
(RefSeq) protein RDM16-like isoform X1
  KO
K12843  U4/U6 small nuclear ribonucleoprotein PRP3
Organism
vun  Vigna unguiculata (cowpea)
Pathway
vun03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vun00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114172970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vun03041]
    114172970
Spliceosome [BR:vun03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    114172970
SSDB
Motif
Pfam: PRP3 Prp3_C SabA_adhesion
Other DBs
NCBI-GeneID: 114172970
NCBI-ProteinID: XP_027912940
LinkDB
Position
2:32613818..32618988
AA seq 862 aa
MDNRAKSEKRSKDRHLERDDKYHRDSKDHHNHRSDSNHKRDHKSRDNDRDRNYERDGNKD
RGRTYDREGSKDRGKTYDREGSRDRDRVHDSEGSKDKDKAYERESGKDRSKVKRDDGRED
LVESRYSSHSHKRKEREHSEDRDFEDKKIKVSEERKEGKRERRKFGDKVKKEEEEDGDDN
NIRGIHEAKVKEEDTEGAHGSASSKDTVFVQNGALGSLAVAPMSVFETSLAPPPPFPIKV
SLNSTTNENKGVSITRSHEVTGKSSTDGSSSTAGKAGSLSIDALAKAKKALQMQKELSEK
LKKIPQLNKSSTQNSHGSSNLGSNSESASAVMPKGSSSASFGHVANMSIFPSATPPASGT
SAAGIANATLPNLEAVRRAQELAARMGFRQDPQFAPLINMFPGQMVTDVAILQKPTKAPV
LRLDAQGREIDEHGNVISVTKPVNLSTLKVNINKQKKEAFEILQPVLDVDPESNPYFDES
MGINKTKILRPKRMSFQFVEEGKWSRDAETIKLKSKFGEAQAKEHKAKQAQLAKAKAAPD
INPNLIEITERVVIKEKPKDQIPDIEWWDLPLVHSGNYGDIDNETIAEDKVKIENITFLV
HHPRPIEPPAEPTPPPPQPLKLTKQEQKKLRTQRRIAKEKDRQEMIRQGVIEPPKPKVKI
SNLMKVLGSEATQDPTRLEKEVRSAAAEREQAHIDRNIARKLTPAELREKKERKLFDDPN
TVETIVSLYRINDLSHPKARFRVDVNAQENRLSGRAVICDGISVVVVEGGSKSIKRYGKL
MLRRINWSDFSKEKEENEDSEDDEKPANKCVLVWQGSVAKPNFNRFSVHDCITEAAARKV
FVDAGVPHYWDQAINYVEDEAV
NT seq 2589 nt   +upstreamnt  +downstreamnt
atggacaatagagcgaaatctgaaaaaagaagtaaagatcgacacctggaacgtgatgac
aaataccatcgtgattccaaagaccaccacaatcatcgatcagattcgaatcacaagcgt
gaccacaaatccagggataacgatagggataggaattatgaaagagatggaaacaaggac
aggggtaggacttatgatagagaaggaagcaaggataggggtaagacttatgacagagaa
ggaagcagggatagggatagggttcatgacagtgaaggaagcaaggataaggacaaggct
tacgaaagagagagtggcaaagataggtcaaaggtgaagcgtgatgatggtagggaagat
ttggtggagtcacgatactcctcacattctcataagcggaaagagagggagcacagtgag
gacagagactttgaggacaagaaaattaaggtttctgaggagaggaaggaaggaaagagg
gaacggaggaaatttggtgataaagtcaagaaggaggaagaagaagatggtgatgataat
aatattagaggcattcatgaggccaaggttaaggaggaagacactgaaggtgcccatggt
tcagcttcttccaaagacactgtatttgtccaaaacggtgccttgggatcacttgctgtg
gcgcccatgagtgtgtttgagacatctttagctcctcctcctccatttcctatcaaggta
tctttgaattctaccacaaatgaaaataagggcgttagtattaccaggtctcatgaggtt
actggaaaatctagtacagatgggtcatcttcaactgctggaaaagctggaagcctgtcg
attgatgctttagctaaggctaagaaagccttacaaatgcagaaagagttgtcagaaaag
ctgaagaaaattcctcagttgaacaagagttctacccaaaattcacatggaagctcaaac
ttgggttcaaacagtgaatctgcctctgcagtcatgccaaaaggttccagctcagcttct
tttggccatgttgcaaatatgtcaattttcccctctgctactcctccagcaagtggcact
agtgctgctggtattgcaaatgcaactcttcccaacttggaagctgtcaggcgggctcag
gagcttgctgcaaggatgggatttcgtcaagatccacaatttgctcctctgataaatatg
tttcctggtcagatggtaacagatgttgctattctgcaaaaaccaacaaaggcccctgtt
cttcgacttgatgctcaagggagggaaatagatgaacatggaaatgttattagtgtgacc
aagcccgtcaaccttagcacattaaaggtcaacattaacaaacaaaagaaggaagcattt
gaaatactgcaacctgtgttggatgttgatcctgaatcaaatccttattttgatgaaagt
atgggtatcaacaaaacaaagatcctgcgacccaagaggatgagtttccaatttgtggag
gaaggaaaatggtcaagagatgctgaaacaataaaattgaagagtaaatttggagaagct
caagcaaaagagcacaaggccaaacaagcacagttggcaaaggcaaaggctgctcctgat
atcaatcccaacttaatagaaataacagagagagttgtaattaaagaaaaacccaaggac
caaattccagacatcgagtggtgggacctgcctcttgtgcattctggaaactatggagac
attgataacgaaaccatagctgaggataaggtgaaaatagaaaatatcactttccttgtg
catcatccgcgtcctattgaaccacctgccgaacccactcctccaccacctcaaccgctg
aaactaaccaagcaagagcagaagaaactccggacacaaaggcgaatagcgaaggagaaa
gatcgacaagagatgataagacagggtgtgatagaaccaccaaaaccaaaggtcaagatt
agcaatttaatgaaagtacttggctctgaagcaactcaagatcctacccggctggaaaag
gaggtacgcagtgcagccgccgagcgtgagcaggctcacatagataggaacattgcacgc
aagcttactccggcggagctccgggaaaagaaggagagaaagctgtttgatgacccaaat
acagtggagacaattgtgtctctctacagaatcaatgacctctcacatccaaaggcccgt
ttcagagttgatgttaatgctcaagagaaccgtttgagtggacgtgctgtgatttgtgat
ggtatcagtgttgttgttgttgaaggtggaagcaagtcgattaagaggtatgggaaactt
atgcttagacgcattaattggagtgatttttcaaaagagaaagaagaaaatgaagattca
gaagatgatgaaaagcctgccaacaagtgtgttctggtgtggcaaggaagtgttgcaaaa
cccaacttcaataggttcagtgttcatgattgcatcactgaagcagctgccagaaaagtt
tttgtggatgccggtgttcctcattattgggaccaagccatcaactacgtagaagatgaa
gctgtttga

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