Vigna unguiculata (cowpea): 114172970
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Entry
114172970 CDS
T06017
Name
(RefSeq) protein RDM16-like isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114172970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vun03041
]
114172970
Spliceosome [BR:
vun03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
114172970
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
SabA_adhesion
Motif
Other DBs
NCBI-GeneID:
114172970
NCBI-ProteinID:
XP_027912940
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Position
2:32613818..32618988
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AA seq
862 aa
AA seq
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MDNRAKSEKRSKDRHLERDDKYHRDSKDHHNHRSDSNHKRDHKSRDNDRDRNYERDGNKD
RGRTYDREGSKDRGKTYDREGSRDRDRVHDSEGSKDKDKAYERESGKDRSKVKRDDGRED
LVESRYSSHSHKRKEREHSEDRDFEDKKIKVSEERKEGKRERRKFGDKVKKEEEEDGDDN
NIRGIHEAKVKEEDTEGAHGSASSKDTVFVQNGALGSLAVAPMSVFETSLAPPPPFPIKV
SLNSTTNENKGVSITRSHEVTGKSSTDGSSSTAGKAGSLSIDALAKAKKALQMQKELSEK
LKKIPQLNKSSTQNSHGSSNLGSNSESASAVMPKGSSSASFGHVANMSIFPSATPPASGT
SAAGIANATLPNLEAVRRAQELAARMGFRQDPQFAPLINMFPGQMVTDVAILQKPTKAPV
LRLDAQGREIDEHGNVISVTKPVNLSTLKVNINKQKKEAFEILQPVLDVDPESNPYFDES
MGINKTKILRPKRMSFQFVEEGKWSRDAETIKLKSKFGEAQAKEHKAKQAQLAKAKAAPD
INPNLIEITERVVIKEKPKDQIPDIEWWDLPLVHSGNYGDIDNETIAEDKVKIENITFLV
HHPRPIEPPAEPTPPPPQPLKLTKQEQKKLRTQRRIAKEKDRQEMIRQGVIEPPKPKVKI
SNLMKVLGSEATQDPTRLEKEVRSAAAEREQAHIDRNIARKLTPAELREKKERKLFDDPN
TVETIVSLYRINDLSHPKARFRVDVNAQENRLSGRAVICDGISVVVVEGGSKSIKRYGKL
MLRRINWSDFSKEKEENEDSEDDEKPANKCVLVWQGSVAKPNFNRFSVHDCITEAAARKV
FVDAGVPHYWDQAINYVEDEAV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggacaatagagcgaaatctgaaaaaagaagtaaagatcgacacctggaacgtgatgac
aaataccatcgtgattccaaagaccaccacaatcatcgatcagattcgaatcacaagcgt
gaccacaaatccagggataacgatagggataggaattatgaaagagatggaaacaaggac
aggggtaggacttatgatagagaaggaagcaaggataggggtaagacttatgacagagaa
ggaagcagggatagggatagggttcatgacagtgaaggaagcaaggataaggacaaggct
tacgaaagagagagtggcaaagataggtcaaaggtgaagcgtgatgatggtagggaagat
ttggtggagtcacgatactcctcacattctcataagcggaaagagagggagcacagtgag
gacagagactttgaggacaagaaaattaaggtttctgaggagaggaaggaaggaaagagg
gaacggaggaaatttggtgataaagtcaagaaggaggaagaagaagatggtgatgataat
aatattagaggcattcatgaggccaaggttaaggaggaagacactgaaggtgcccatggt
tcagcttcttccaaagacactgtatttgtccaaaacggtgccttgggatcacttgctgtg
gcgcccatgagtgtgtttgagacatctttagctcctcctcctccatttcctatcaaggta
tctttgaattctaccacaaatgaaaataagggcgttagtattaccaggtctcatgaggtt
actggaaaatctagtacagatgggtcatcttcaactgctggaaaagctggaagcctgtcg
attgatgctttagctaaggctaagaaagccttacaaatgcagaaagagttgtcagaaaag
ctgaagaaaattcctcagttgaacaagagttctacccaaaattcacatggaagctcaaac
ttgggttcaaacagtgaatctgcctctgcagtcatgccaaaaggttccagctcagcttct
tttggccatgttgcaaatatgtcaattttcccctctgctactcctccagcaagtggcact
agtgctgctggtattgcaaatgcaactcttcccaacttggaagctgtcaggcgggctcag
gagcttgctgcaaggatgggatttcgtcaagatccacaatttgctcctctgataaatatg
tttcctggtcagatggtaacagatgttgctattctgcaaaaaccaacaaaggcccctgtt
cttcgacttgatgctcaagggagggaaatagatgaacatggaaatgttattagtgtgacc
aagcccgtcaaccttagcacattaaaggtcaacattaacaaacaaaagaaggaagcattt
gaaatactgcaacctgtgttggatgttgatcctgaatcaaatccttattttgatgaaagt
atgggtatcaacaaaacaaagatcctgcgacccaagaggatgagtttccaatttgtggag
gaaggaaaatggtcaagagatgctgaaacaataaaattgaagagtaaatttggagaagct
caagcaaaagagcacaaggccaaacaagcacagttggcaaaggcaaaggctgctcctgat
atcaatcccaacttaatagaaataacagagagagttgtaattaaagaaaaacccaaggac
caaattccagacatcgagtggtgggacctgcctcttgtgcattctggaaactatggagac
attgataacgaaaccatagctgaggataaggtgaaaatagaaaatatcactttccttgtg
catcatccgcgtcctattgaaccacctgccgaacccactcctccaccacctcaaccgctg
aaactaaccaagcaagagcagaagaaactccggacacaaaggcgaatagcgaaggagaaa
gatcgacaagagatgataagacagggtgtgatagaaccaccaaaaccaaaggtcaagatt
agcaatttaatgaaagtacttggctctgaagcaactcaagatcctacccggctggaaaag
gaggtacgcagtgcagccgccgagcgtgagcaggctcacatagataggaacattgcacgc
aagcttactccggcggagctccgggaaaagaaggagagaaagctgtttgatgacccaaat
acagtggagacaattgtgtctctctacagaatcaatgacctctcacatccaaaggcccgt
ttcagagttgatgttaatgctcaagagaaccgtttgagtggacgtgctgtgatttgtgat
ggtatcagtgttgttgttgttgaaggtggaagcaagtcgattaagaggtatgggaaactt
atgcttagacgcattaattggagtgatttttcaaaagagaaagaagaaaatgaagattca
gaagatgatgaaaagcctgccaacaagtgtgttctggtgtggcaaggaagtgttgcaaaa
cccaacttcaataggttcagtgttcatgattgcatcactgaagcagctgccagaaaagtt
tttgtggatgccggtgttcctcattattgggaccaagccatcaactacgtagaagatgaa
gctgtttga
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