Vigna unguiculata (cowpea): 114173353 Help Entry 114173353         CDS       T06017                                  Name (RefSeq) vacuolar sorting protein 39   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism vun  Vigna unguiculata (cowpea) Pathway vun04148   Efferocytosis Brite KEGG Orthology (KO) [BR:vun00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     114173353  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:vun04131]     114173353 Membrane trafficking [BR:vun04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     114173353 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin DALR_1 zf-HC5HC2H DUF2175 NBAS_11th AlaDh_PNT_N zf-HC5HC2H_2 Motif Other DBs NCBI-GeneID:  114173353 NCBI-ProteinID:  XP_027913479 LinkDB All DBs Position 2:complement(28245253..28252323) Genome browser AA seq 996 aa AA seqDB search MVHSAYDCVELVRECPAKIESVEAYGSKLLLGCSDGSLRIFAPETESSSDGSKSYALERN LVGFAKKPVLSMAVVESREFLISLSESIAFHKLPSFETIAVITKAKGANIFCWDHRRGFL CFARQKRVCIFRHDGGRGFVEVKEYVVGDAVKSMCWCGENICLGIRREYVILNASNGTLS EVFTSGRLAPPLVVSLPTGELLLGKENIGVFVDQNGKLLPEGRICWSEAPLEVVIQKPYA IALLPRFVEIRSLRAPYSLIQTVVLRNVRHLCQSNDSMILALDNSVHGLFPVPLGAQIVQ LTASGNFEEALSLCKLLPPEDSSLRAAKEGSIHIRYAHYLFENGSYEEAVEHFLASQVDI THVLSLYPSIILPTTTIVHDLEKLDIYGDASYLSRASSGVSDDMEPSSTSHMSEYDENAA LESKKMNHNMLMALIKYLQKKRYSFIEKATAEGTEEVVLDAVGDNFASYNRLKKSNKGRG SMPVSSGAREMASILDTALLQALLLTGQPSAALELLRGVNYCDLKICEEILRKDNHNVAL LELYKHNSLHREALELLHKLLDESKSGQSKITQSFKPEDIVEYLKPLCGTDPILVLEFSM LVLESCPSQTIELFLSGNIPADMVSSYLKKHSPTMQARYLELMLAMNENAVSGNLQNEMV HIYLSEVLDWHAGLCAQQKWDEKDYSPTRKKLLSALETIAGYNPEALLKRLPQDALYEER AILLGKMNQHELALSLYVHKLNAPELALSYCDRVYESMRQPSAKYSSNIYLVLLQIYLNP RRTTAGFEKRITNLLSPQNKTIPKLTSTPSMRSRARGSKKIAAIEGAEDTKVSLSSTDSG RSDGDADEYSEGGSTTIMLDEVLDLLSRRWDRINGAQALKLLPKETKLQDLLSFLGPLLK KSSEMYRNCSVIKSLRQSENLQVKDELYSQRKTVVKITGDSMCSLCHKKIGTSVFAVYPN GSTLVHFVCFRDSQNMKVGGKGSQLKKRLETAGYTN NT seq 2991 nt NT seq  +upstreamnt  +downstreamnt atggtgcacagcgcgtacgattgcgtggagctggtgcgtgagtgccccgccaagatcgaa tccgtcgaagcctacggttccaagctcctactgggttgttccgatggatcgctccgaata ttcgcgccggaaacggaatcctcctccgatggctccaagtcctacgcgttggagaggaac cttgtcgggttcgcgaagaagcccgtgctatcaatggcggtggtggagtcgcgagagttc ctcatatcgctctccgaatctatcgctttccacaaactaccttccttcgagactatcgcg gtgatcaccaaggccaagggcgccaacatcttctgctgggaccaccgccgaggcttcctc tgcttcgccaggcagaagcgcgtttgcatcttcagacacgacggtggcaggggatttgtg gaagtgaaagagtatgtcgtgggggatgcggtgaaatccatgtgttggtgcggcgagaat atatgtttggggattagaagagagtacgtgattctgaatgcttcgaatggaactctgtct gaggttttcacttcggggagactagcgcctcctctggtcgtttctcttcccactggagaa ctccttcttggaaaggagaatattggggtttttgtggaccaaaatgggaagcttcttccc gaaggtaggatttgctggtctgaggctcctttggaagttgtgattcagaagccatacgct atagctttgctgcccagatttgtggagattcgatctctccgagctccttattcgttgata cagacagttgttcttcgaaatgttcgccacctttgccagagcaatgattccatgatactt gctttggataattcagttcatggcctcttccctgttcccctaggagcccagatagtccaa ttaacagcttctggcaactttgaggaggccttgtcactgtgcaaacttcttccacctgaa gattcaagtctccgtgctgcaaaggagggttcaattcatataagatacgctcactatctt tttgagaatgggagctatgaagaggctgtggaacattttctggcatctcaagtagatata acccatgtgctttcactgtatccatcaattattcttccaaccacaactattgttcacgac ctagaaaagttggacatttatggggatgcttcatatctctcaagagcttcttcaggtgtg tcagatgatatggaaccctcatcaacatctcatatgtcagaatatgatgagaatgcagca cttgaatcaaaaaaaatgaaccataatatgcttatggctctcataaaatacttacagaag aagagatatagttttattgagaaggccactgctgaaggaactgaagaagtcgttttagat gctgttggggataactttgcatcttacaacaggcttaagaaatcaaacaaggggcgtggt agtatgcctgttagttctggagctcgggagatggcttcaatattggatactgctttactc caagctttgcttcttactggacaaccttcagcggctttagagttactgagaggtgttaac tactgtgatttgaaaatatgtgaagaaatacttcgaaaagacaaccacaatgttgcttta ttagaactttacaagcacaactcattgcaccgggaggctcttgaacttcttcacaaattg ttggatgagtcaaaatctggccagtctaaaattacacaaagtttcaagcctgaggatatt gtggagtatctcaagccgctctgtgggacagaccccatacttgtactagagttctcaatg cttgttcttgaaagctgcccatctcaaactattgagctctttctgtctggaaacattcca gctgatatggtgagctcatatttgaagaagcattctccaaccatgcaagctaggtacttg gagctcatgcttgcaatgaatgagaatgcggtatctggcaatttgcagaatgaaatggta cacatatatctttctgaagtactcgattggcatgctggtttatgtgctcaacaaaaatgg gatgagaaagattattccccaacaagaaaaaaattattgtctgccttggagaccattgca ggatacaatccagaggctttgctaaaacgtcttccacaggatgctttatatgaagagcgt gcgatattgttgggaaaaatgaaccaacatgaactggcattatctttgtatgttcacaag ctcaatgctccagaactggcattgtcatattgtgatcgggtctatgagtctatgcgccag ccatctgcaaaatattccagtaacatataccttgttcttttgcaaatttatttgaatcct cgaaggaccacagcaggttttgaaaagagaattacaaatctattatccccacagaataaa accattccaaagcttacttctacgccatccatgagaagtagagctcgagggtctaagaaa attgctgcaatagagggtgcagaggacacaaaagttagtttaagtagcactgacagtggc aggagtgatggtgatgcagatgaatatagtgagggtggttctactactatcatgcttgat gaggtccttgatttgttgagccgcaggtgggatagaataaatggagctcaggcccttaaa cttctaccgaaagagacaaaattacaggacctgctctcatttcttggaccccttttgaaa aaatcaagtgaaatgtaccgaaactgttcggtgatcaagagcttgagacaaagtgagaac cttcaggtgaaagatgaactgtatagtcagaggaaaacagtagtgaagataaccggagat agcatgtgctctctgtgccataagaaaatagggactagtgtttttgctgtctacccaaat ggtagcactctcgtgcactttgtctgtttcagagattctcaaaatatgaaagtgggtggc aaagggtctcaattgaagaagcgattagaaactgctggctataccaattag

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