Entry |
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Name |
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
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KO |
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Organism |
vun Vigna unguiculata (cowpea)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:vun00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114173421
03420 Nucleotide excision repair
114173421
03430 Mismatch repair
114173421
03440 Homologous recombination
114173421
03460 Fanconi anemia pathway
114173421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:vun03000]
114173421
03032 DNA replication proteins [BR:vun03032]
114173421
03400 DNA repair and recombination proteins [BR:vun03400]
114173421
Transcription factors [BR:vun03000]
Eukaryotic type
Zinc finger
Cys2His2 others
114173421
DNA replication proteins [BR:vun03032]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
114173421
DNA repair and recombination proteins [BR:vun03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
114173421
MMR (mismatch excision repair)
114173421
DSBR (double strand breaks repair)
HR (homologous recombination)
114173421
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
2:complement(25647664..25651328)
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AA seq |
873 aa
MAGSLTPGAIKEICGANCSSSLKPVLQVIDLKLVQSQQANNTERYRLVLSDGSFYQQGML
ATQMNELVHSAKLQKGSVVRLTQFICNDVQNRKIIVIIDLDVVVEKCELIGEPVALPKDG
SAESGTGQSGVTPGNSQSLNNRSHPGSISARPNVGSMPARPNMAVPSPDHPRMNAPASSV
YSGISNPGSSYSSNAPPTYPKVEPGANFSRSAPFTGSHGDQNMGIRHPQSETSRTLPNSF
SRAPQPMYRQPSPMYTNRGPIGKNEAPPRIIPIAALNPYQNMWTIKARVTAKGELRHYNN
ARGDGKVFSFDLLDSDGGQIRATCFNSVADQFYNLIEAGKVYLVSRGSIKPAQKNFNHLP
NDQELTLDMTSIIQPCPDDDNSIPKQTFNFRPISEIESLESNTIVDVIGVVTSISPTASI
MRKNGTETQKRTLQLKDMSGRSVELTLWGNFCNVEGQRLQNICDDGKFPVLAAKTVRIND
FNGKSVGTIMTSLLFVEPDFPEAYTLKRWFENEGKNVPTLSISRDTSSFPKNDNRKTVSQ
IKDEKLGTSEKPDWISVCATISYLKCDNFCYPGCPIMIGDRQCNKKVTNNGDGKWICDRC
NQSVDACDYRYILSFQIMDHTGVTWVTAFQESGEEIMGMPAKDLYYLKYEEQDDERFAEI
IRKVIFTEYVFKLKVKEETFSDEQRVKSTVVKAEKVNYASKSRVSLELIDKLLTGKSEGA
TTVTNSLSGNTGMGTVETGQVMPPAYNPIKSSTNSNRDFGMPANQVGQQQYGNQYGNFGS
AGAAGAYTSCTNCGGSGHTSILCPNVRNVSGQSSGGGFSNRASYGGSGGGGGASGECFKC
HQPGHWARDCPGSGAATASYGSTNTMHGRFGGY |
NT seq |
2622 nt +upstreamnt +downstreamnt
atggcggggtcactgacgccaggggccataaaagaaatatgcggtgccaattgttccagt
agtttgaaaccagtgttgcaagttatagatttgaagctggtgcagtcgcaacaagccaat
aacaccgagaggtaccggctggttctatctgacggttccttttaccagcaaggcatgctc
gccacgcagatgaacgaactagttcattctgcaaagttgcagaaaggttccgtcgttagg
ctcacacagttcatctgcaacgatgtccagaaccgcaagatcattgtcatcattgaccta
gacgttgtagtggaaaagtgtgagttgattggagaacctgttgcgttaccaaaagatgga
tctgcagaatcgggcactggtcaatcaggagtcacccctggaaattcacaatctttgaat
aaccgttcacacccaggcagcatttctgctagaccgaatgtaggcagcatgcctgctaga
ccgaatatggccgtaccatctccagatcatccaagaatgaatgctcctgccagtagtgtt
tattctggtatttccaaccctggatctagttattctagtaatgcacctcctacatatcct
aaagtagaacccggagctaatttttctagatcagcaccatttactggatctcatggtgat
cagaacatgggtattcgtcatccccaatctgagacttcaaggaccttgccaaactctttt
tctcgtgcacctcagcctatgtatcggcaaccatctccaatgtacactaacagagggcca
attggaaaaaatgaagctccccctaggataattccaatagcagcattgaatccttaccag
aatatgtggacaattaaagccagagtaacagctaagggagaactcaggcactataacaat
gctcgaggtgatggcaaggtgttttcatttgaccttttggattctgatggtgggcagatt
cgggcaacttgcttcaatagtgtggctgatcagttctataatttgattgaagctggtaag
gtatacctagtttccaggggaagcataaagccagctcagaagaatttcaatcaccttccc
aatgatcaagagttaacccttgatatgacatcgatcatacaaccatgccctgatgatgat
aactcaattccaaagcagacttttaattttcgccccattagtgaaattgaaagtttggaa
agcaataccatagtggatgtgattggtgtggtgacttcaattagccctacagcttcgatc
atgagaaaaaatggtactgaaactcagaagagaacactccagttgaaagacatgtctggc
cgaagtgttgagttaacattgtggggaaatttttgcaacgtggaaggacaaaggctgcaa
aatatttgtgatgatgggaaatttccagttttagctgcaaaaactgtcagaattaatgat
ttcaatggaaagtctgttgggactataatgactagcctactgttcgtagagcctgatttt
ccagaggcttacacactgaaaagatggtttgaaaatgaagggaagaatgttccaactctc
tctatctccagagatacatctagttttcctaagaatgataatcggaaaactgtatctcaa
attaaagatgagaagttagggacttcagagaagcctgattggatatcggtctgtgcaact
atttcatacctaaagtgtgataacttctgttacccaggatgtcctatcatgataggggat
agacaatgtaacaaaaaagtgactaacaatggtgatggaaaatggatttgtgataggtgt
aaccaatctgttgacgcttgtgattataggtacatactgtcattccagataatggatcac
acaggtgtaacatgggttactgctttccaggagagtggtgaggagatcatgggcatgcct
gcaaaagatttgtattatctgaagtatgaagagcaagatgatgaaagatttgctgaaatc
atccggaaggttatcttcaccgagtacgtgttcaagttgaaagtaaaggaggaaacattc
agtgatgaacaacgcgttaagtcaactgtggttaaagcagaaaaggtaaactatgcatct
aaatccagagttagtttggaattgattgataaactcttgactgggaaatcagaaggtgct
accaccgttaccaactcgttatccggtaatactggaatggggactgttgaaactggtcaa
gtaatgccaccagcttataacccaataaagagtagcactaatagtaatagagattttggg
atgccagcaaatcaagtgggtcaacaacaatatggaaaccaatatggcaattttggttca
gcaggtgctgctggtgcatatacatcatgcaccaactgtggaggttctggtcatacttct
atactttgcccaaatgttagaaatgtgtctggacagtcttcaggagggggcttttccaac
agggcatcatatggtggatcaggtggtggtggtggtgcttctggtgaatgttttaaatgc
catcaacctggccactgggcaagagactgtcctggttccggtgcagcaactgcttcatat
ggaagcactaatacaatgcatggaagatttggaggatattga |