KEGG   Vigna unguiculata (cowpea): 114173616
Entry
114173616         CDS       T06017                                 
Name
(RefSeq) protein RAE1
  KO
K14298  mRNA export factor
Organism
vun  Vigna unguiculata (cowpea)
Pathway
vun03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:vun00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    114173616
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vun03019]
    114173616
   03036 Chromosome and associated proteins [BR:vun03036]
    114173616
Messenger RNA biogenesis [BR:vun03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     114173616
Chromosome and associated proteins [BR:vun03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    114173616
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 ANAPC4_WD40 EIF3I Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 WD40_RFWD3 NBCH_WD40 Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR75_1st SdiA-regulated Beta-prop_BBS7
Other DBs
NCBI-GeneID: 114173616
NCBI-ProteinID: XP_027913906
LinkDB
Position
2:13390603..13402589
AA seq 346 aa
MSTFGAANTNPNKSFEVAQPPSDSISSLSFSPKANFLVATSWDNQVRCWEITRNGTVVSS
TPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLTSGGQPMTVAMHDAPVKDLAWI
PEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPERCYAITVKHPLMVVGTADRNLIVFNLQ
NPQTEYKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDAQQSKNFTFKCHREN
NEIYSVNSLNFHPIHHTFATAGSDGAFNFWDKDSKQRLKAMQRCSQPIPCSAFNNDGSIF
AYAVCYDWSKGAENHNPATAKNYIYLHLPQESEVKGKPRAGATGRK
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgtccaccttcggagccgcaaataccaatcccaacaaatcctttgaggtagcccaaccg
ccctctgattcaatttcaagtctttcgttcagtcccaaggccaatttcctcgtcgctact
tcatgggataatcaggttcgttgttgggagataacaaggaatgggactgttgtctccagt
actcccaaggcttccatttctcatgaccagccggttttgtgctctgcttggaaggatgat
ggaacaaccgttttttctgggggctgcgacaagcaggtcaagatgtggccacttacttct
ggtggacaaccaatgactgttgcgatgcacgatgcacctgtgaaagatcttgcctggata
ccggagatgaatcttttagctactggaagctgggacaagaccctgaagtattgggataca
aggcaaccaaatccagtgcatacacaacaacttcctgagcggtgttatgcaataacagtc
aaacatcctctgatggtagtggggactgcagatagaaatctgattgtcttcaacttgcaa
aaccctcagactgaatacaagagaattgtatctccactgaaatatcagacaagatgtgtt
gcggcttttccagatcaacaaggttttttggttggatcaatagaaggaagggttggagta
catcacctggatgatgcacaacaaagcaagaattttacttttaaatgccacagagagaac
aatgagatatattcagtcaactccttaaatttccatccgatacatcacacttttgctact
gccggatctgatggtgcttttaatttctgggacaaggacagtaaacagaggctcaaggct
atgcaaagatgtagtcaacccataccttgcagtgcattcaataatgatggttccatattt
gcttacgcggtttgttatgattggagcaagggtgcagaaaatcacaatccggctacagcg
aagaactacatttatttgcacctaccacaggagtctgaggttaaaggtaagccacgagct
ggagccacgggaagaaagtga

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