Vigna unguiculata (cowpea): 114173898
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Entry
114173898 CDS
T06017
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114173898
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vun01009
]
114173898
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vun03041
]
114173898
Protein phosphatases and associated proteins [BR:
vun01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114173898
Spliceosome [BR:
vun03041
]
Common components
Common spliceosomal components
SR proteins
114173898
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_DEAH11
RRM_5
Motif
Other DBs
NCBI-GeneID:
114173898
NCBI-ProteinID:
XP_027914366
LinkDB
All DBs
Position
2:complement(27090784..27093759)
Genome browser
AA seq
245 aa
AA seq
DB search
MADSPPRRNSRSPSPWRAQSRSRSRSRSRPRSRSRSRSFEKQRPRSRSRSRGRSRSRSPE
RTETKNTGNTLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFITMDTV
EDANRCIKYLNQSVLEGRYITVERSRRKRARTPTPGHYLGLKSTRDYGYRGDRGRYRGGG
SGRDDYAYRGERGRSPRRSPYRGGRDYSPRHSPPPYGGRTRRDRSRSLPYSPYGSPDRRY
ARGSR
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggccgattctccgccacgaaggaattcaaggtccccttccccttggagggctcagtca
agatcgaggtcaaggtctagatccaggccaaggtctaggtcccggtcaagatcatttgaa
aaacaaaggccaaggtctcgctccagaagtcgtggaagatcaagatcaagaagtcctgaa
aggacggagactaaaaatacagggaatacactttatgtcactggcctatcgtcaagggtc
actgagagagacctggaggagcatttctctaaagagggaaaggttgcttcgtgctttctt
gtggtggagcctcgtactcgtatttctcgaggttttgcttttattacaatggatactgtt
gaggatgcaaaccgctgcatcaaatatctcaatcaatcagttttagagggtcgctatatc
actgttgagcggtcccgaagaaagcgtgcaagaactcctacacctggacactatcttggc
ctgaaaagtactcgagactatggatatcgcggtgaccgtggaagatatagaggaggtggc
tctggtcgtgatgattatgcatatcgtggagagcgtggaaggtctccaaggcgctcacct
tatcgtggtggtagagattattctccgaggcattcaccgccaccttatggcggaagaact
aggagggataggtcccgatcacttccatactctccatatggtagcccagacaggaggtat
gctcgtggatctaggtga
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integrated database retrieval system
