Vigna unguiculata (cowpea): 114174066
Help
Entry
114174066 CDS
T06017
Name
(RefSeq) LOW QUALITY PROTEIN: paired amphipathic helix protein Sin3-like 4
KO
K11644
paired amphipathic helix protein Sin3a
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vun03036
]
114174066
Chromosome and associated proteins [BR:
vun03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
114174066
REST complex
114174066
Heterochromatin formation proteins
Other heterochromatin formation proteins
114174066
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
Orthopox_F6
CooC_C
DUF7382
Tail_tube
Motif
Other DBs
NCBI-GeneID:
114174066
NCBI-ProteinID:
XP_027914608
LinkDB
All DBs
Position
2:22018558..22031045
Genome browser
AA seq
1402 aa
AA seq
DB search
MKRSRDEVFTSCSQLKRPVVSARGEASGQPQMANGGAQKLTTNDALAYLKAVKDIFQDKR
DKYDDFLEVMKDFKAQRIDTAGVIGRVKELFKGHRDLILGFNTFLPKGYEITLPSEDEQP
APKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVAAIFQDH
PDLLDEFTHFLPDASAAASTHYASARNSILRDRSSMPTVRPMHVEKRERTMASHGDRDPS
VDRPDPDQDRGLLRIEKERRRAEKEKERREDRDKREREKDDRDYEHDRERFPHKRNRKVE
DSGAEPLLDADENFGTRPMSSTCDDKNSLKSMYSQEFAFCEKVKEKLRNPDDYQEFLKCL
HIYSREIITRQELQSLVGDLLGKYPDLMEGFNEFLLQSEKNDGGFLAGVMNKKSLWNDGH
GLKQMKGEDRERERDRDRDRYRDDGMKERDREFRERDKSTVIANKDVLGSKMSLYPSKDK
YLSKPINELDLSNCDQCTPSYRLLPKNYPIPIASQKTELGTEVLNDHWVSVTSGSEDYSF
KHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLDKINNNTIKGDSLIRIEEHL
TAINLRCIERLYGDHGLDVMEVLRKNAPLALPVILTRLKQKQEEWARCRADFSKVWAEIY
SKNYHKSLDHRSFYFKQQDTKSLSTKALLAEIKEISEKKRKEDDVLLAIAAGNRRPILPN
MEFKYSDQDIHEDLYQLIKYSCGEICTTEHVDKVMKVWTTFLEPMLCVPSRPQGAEDTED
VVKTKNNSVKNGTASVVESDGSPVVGATVMNQKHINVSRNGDGCMPVDQSTSSKAWQSNG
DSGVREDRYLDDRVLRKTETLGNNTQHGKMNNIAFPPNELSGFNNKQDQSSERLVNANVS
PASGTEQSNGRTNIDNLSGLTATPARPVNASAEGGPDVPPSEGGDSARPGTSTNGAITGG
TKVHRYQEESVRPFKSEREEVHKGKDGGMSRPYQDRHGDDVCGETRGENDVDADDEGEES
PHRSSEDSENASENVDVSGSESADGEECSREEHEDGEHDNKAESEGEAEGIADAHDVEGD
GMSLPYSERFLLTVKPLAKHVLPMLHEKDRNSRVFYGNDSFYVLFRLHQTLYERIQSAKI
NSSSADRKWKASSDTSSTDQYDRFMNALYSLLDGSSDNTKFEDDCRAIIGIQSYVLFTLD
KLIYKLVKQLQAVAADEMDNKLLQLHAYEKSRKPEKFVDIVYHENARVLLHDENIYRVEY
SPGATKLSIQLMDSGHDKPEVTAVSMDPNFSTYLHNDFLSVVPDXKEKSGIFLKRNKRRY
AGSDEFSSQAMEGLQIINGLECKIACSSSKVSYVLDTEDFLYRVRRKRRVLHPRSSGTHE
QAQSSNIRSRRLQRFRNMFSIT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtctagagatgaagttttcacgagttgttctcaactcaaacggcctgtggtg
tctgcccgaggagaagcgtctgggcaaccgcagatggcaaatggaggtgctcagaaattg
acaactaatgatgccctagcatatcttaaagcagtaaaggatatatttcaagataagagg
gacaagtatgacgactttttggaggttatgaaagatttcaaggctcaaagaattgatacc
gctggtgtcattggaagagtgaaggagctgtttaaaggccatagagatcttatattggga
tttaacaccttcttgcctaaggggtatgaaatcacacttccgtcagaagatgaacaacct
gctccaaagaaacctgttgaatttgaagaagctataaattttgtgaacaaaataaagact
cgttttcaaggcgacgatcatgtgtacaaatcatttcttgacatattgaatatgtacaga
aaggaaaacaagtctattaccgaggtctaccaggaggttgctgctattttccaggaccac
cctgatcttcttgatgagtttacacatttccttccagacgcttctgcagctgcctctact
cattatgcttctgctcgaaattctattcttcgtgataggagctcaatgccaacagtacgg
ccaatgcatgttgaaaagcgagaaaggaccatggcttcacatggggatcgtgaccccagt
gttgatcgtcctgatccagaccaggacagaggtttgttaaggatagaaaaggagaggaga
cgtgcggagaaggaaaaggaacgcagagaagatagagataagagagaacgtgaaaaggat
gatagagattatgagcatgatagggagcgatttcctcacaaacggaatcgtaaggttgag
gactctggagctgaaccattgcttgatgcagatgaaaattttggtacgcgtcctatgtca
tccacttgtgatgataaaaattctctgaaaagtatgtacagtcaagagtttgctttctgc
gaaaaagtcaaagaaaaattacggaatcctgatgactatcaggaatttttgaagtgctta
catatttacagcagggaaataattacccgacaagagttgcagtcattggtgggcgattta
ctgggaaagtatccagatcttatggaggggtttaatgaatttttgttacaatctgaaaaa
aatgatggtggatttcttgctggtgttatgaataaaaagtccttatggaatgatggacat
ggactgaaacaaatgaagggtgaagacagggaaagagaaagggatcgagatagagaccgt
tatagggatgatgggatgaaagaaagggaccgtgagttccgagaaagggataaatctact
gtgattgccaacaaagatgttttaggctctaagatgtctctatatcccagcaaggataag
tatttatcaaaacctataaatgagctggacctttctaactgcgaccagtgtactcctagt
tatcggctcctaccaaaaaattacccaatacctatagctagccagaaaacagaacttggt
actgaagtgttgaatgatcactgggtatctgtcacttcaggaagtgaggattactccttc
aaacatatgcgcaaaaatcagtatgaagagagcttgtttagatgcgaagatgacaggttt
gaacttgacatgttgttagagtctgtgaatgtgacaaccaagcgagtagaagagctgtta
gacaagatcaataataataccattaaaggagacagcctaattcgtattgaagagcactta
acagctataaatcttaggtgtattgaacgattatatggtgatcatgggcttgatgtgatg
gaggttttaaggaagaatgcacctctagctttgccagtgatattaacacgcttgaagcag
aaacaggaagagtgggcaaggtgccgtgctgattttagtaaagtttgggctgaaatatat
tctaagaactatcacaaatctcttgatcatcgtagcttctactttaagcagcaggataca
aaaagccttagcaccaaagccttgctcgcagaaatcaaagaaattagtgaaaagaaacgc
aaagaagatgatgttcttcttgctattgctgctggcaacagacggccaattctaccaaac
atggaatttaagtattctgatcaagatattcatgaagatttgtatcagctcataaaatat
tcctgtggagaaatttgcacaaccgaacatgtggataaagttatgaaggtttggacaaca
tttttagaaccaatgctttgtgttccttcacggccccagggtgcagaggatacagaagat
gttgtcaagactaagaataatagtgtcaagaatggtacggcaagtgttgttgaaagtgat
ggtagccctgttgtgggtgctaccgtcatgaatcaaaagcatataaatgtttccagaaat
ggggatggttgtatgccagtagatcagtcaacttctagtaaagcatggcaatcaaatggt
gatagtggggttagagaggataggtatcttgatgaccgtgtattacgtaaaactgaaact
ttgggaaataatacacaacatggtaaaatgaataatattgctttcccacctaatgaacta
tcaggatttaataataagcaagaccagtctagtgaaaggttagtgaatgcaaatgtctct
cccgcatctggaacggagcaaagcaatggaaggacaaacatagataatttgtcaggactc
actgccaccccagctagacctgttaatgcatctgctgaaggaggacctgatgttccacct
tcagagggtggtgattctgcaagaccgggtacatccacaaatggggccatcaccggaggc
accaaagtccaccgataccaagaggaatcagttcgacccttcaaaagtgaaagagaagag
gtgcataaaggaaaggatggtggtatgagtcggccatatcaagatagacatggggacgat
gtttgtggtgaaaccagaggagaaaacgatgttgatgctgatgatgaaggtgaagaaagt
cctcacaggtcatcagaggacagtgaaaatgcatctgaaaatgttgatgtttctggcagc
gagtctgctgatggtgaggagtgttctcgagaagagcatgaggatggagaacatgataac
aaggctgagagtgaaggtgaagctgaaggaatagccgatgcccatgacgttgaaggagat
ggaatgtcattgccatactctgaacgctttctcctaactgtgaagccactggcaaagcat
gttcttccaatgttacatgagaaggacaggaattcacgagttttctatggaaacgattcc
ttttatgttctttttagacttcatcagacattgtatgagaggatacaatcagcaaagatt
aactcatcatctgctgataggaaatggaaggcttcgagtgatacaagctccacggatcaa
tatgacagattcatgaatgccctttatagtttgctcgacggttcgtctgataatacaaaa
tttgaggatgattgtcgagctataattggaattcagtcatatgtcttattcacattagac
aagctgatatataaactcgttaaacagcttcaagctgttgctgctgatgagatggataat
aagcttctacaactacatgcatatgagaaatcaagaaaacctgaaaaatttgtcgacata
gtttatcatgaaaatgcccgtgttcttctccatgatgagaacatatatcgtgttgaatat
tcacctggagcaacgaaactgtctattcaactgatggactctggacatgataaacctgaa
gtgactgctgtttcgatggaccctaatttttcaacctatctacacaatgacttcctgtct
gtcgtccctgacnaaaaagagaagtcagggattttcttgaagaggaataaacgtagatat
gctggtagtgatgaattttcaagtcaggctatggaaggactacagattatcaatggtctg
gagtgcaagattgcttgcagttcatctaaggtctcttacgttttagatactgaagacttt
ttgtatcgggtgagaaggaaacgaagagtcttgcatccgaggagttcaggcacccatgaa
caggcacagtcttcaaacattcgttctagaagactgcaacgattccgcaacatgttttcc
attacatga
DBGET
integrated database retrieval system
