Vigna unguiculata (cowpea): 114174239
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Entry
114174239 CDS
T06017
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 34 isoform X1
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vun03400
]
114174239
Enzymes [BR:
vun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
114174239
DNA repair and recombination proteins [BR:
vun03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
114174239
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
RQC
HRDC
ResIII
DUF4349
Alk_phosphatase
Motif
Other DBs
NCBI-GeneID:
114174239
NCBI-ProteinID:
XP_027914837
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All DBs
Position
2:25908131..25919336
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AA seq
702 aa
AA seq
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MESNEILEELLNIEVEIQDVQEQIRALIERQENLYERKSELSAILEACKESGNEAGNVAS
SAVEDWSGTFEWDSEANDVRLNVFGISSYRANQREIINAIMSGRDVLVIMAAGGGKSLCY
QLPAVLREGIALVVSPLLSLIQDQVMGLTALGIPAYMLTSTNKGDEKFIYKALEKGEGDL
KVLYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKSLGILKTQ
FPNVPMVALTATATQRVQNDLTEMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGRVVIDEI
AQFIQESYPNNESGIVYCFSRKECEQVAKELRERRISADYYHADMDVNAREKVHMRWSNN
KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYFRPGDV
PRQSSMVFYENSGLQNLYDIVRYCQSKRQCRRSAFFRHFAEPLQECNEMCDICAWSREVK
EVDLSDYAKLMVSLLQNMHANDQRSTMLQLVDKMKIKQKELGSELKREEIEQLILHLLLG
RFLKEEFQHTAYATNAYIAVGPLAKQILQGKKTVTLEIYTEQRTNAGGVRSVKRRSLGSS
GLELKLDELRKELSYAGGILPHSVLSMEQISLLSSQKPNSLEQLEKVIGKLKTEMYGNRI
LEQIQKYSDSKPTDKQETDGRAAKRSKTKKNLVLIDSSEDEE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggagagcaacgagattctggaggagcttctcaacatcgaggtcgagattcaagatgtt
caagaacaaataagggcgttgattgagagacaagagaatttgtatgagaggaaatcggag
ctgagtgctattctagaagcgtgtaaggaatctggtaacgaggccggtaatgtggcttca
agcgccgtggaagattggagtggtacatttgaatgggattctgaagcaaatgatgttagg
ttgaatgtttttggcatttcgtcttaccgtgcaaatcaaagagagataattaatgccatt
atgagtggaagagacgttctggttattatggctgcaggtggtggcaagagtctctgctac
cagcttcctgctgttcttcgtgaaggaattgctctagttgtcagtcctttgctttcctta
attcaagatcaggtaatgggtttgactgcactgggcattcctgcttatatgttgacttca
acaaataagggagatgagaagttcatatacaaggctttggagaagggagagggggacctc
aaagtattgtacgtcaccccagaaaagatatcaaaaagcaagaggtttatgtcaaaactt
gaaaaatgccatcatgccggtcgtctctctctaatttcaattgatgaagcacattgctgt
agtcagtggggccatgactttcgacctgactacaagagcctcggtattctcaagacacag
ttccctaatgttcctatggttgctttgactgcaactgctactcagagggtgcaaaatgat
cttacagagatgttgcatattcctagatgtgtcaaatttgttagcacagtcaatagacca
aatttgttttatatggtaaaggaaaagtcatcagttgggagggtagtcattgatgaaatt
gcacaattcattcaagaatcttatccaaataatgaatcagggattgtttattgcttctct
aggaaggaatgtgaacaggttgcgaaggagttgagggagagaagaatttcagctgattat
tatcatgcagatatggatgtaaatgctcgggaaaaagttcatatgcggtggagcaataat
aagctgcaggtcatagttggcacagtagcttttggtatgggaatcaacaaaccagatgtc
aggtttgtcatccatcatagtttgagtaaatcaatggaaacatactaccaggaaagtgga
cgagctggtcgagatggacttccttccgaatgcctactttactttagacctggtgatgtt
ccacggcagagttcaatggtcttctatgaaaattcggggctacagaatctctatgacata
gtacgatattgtcagtccaaaagacaatgccgacgaagtgcctttttccgacattttgct
gagccacttcaagagtgcaatgagatgtgtgacatctgtgcatggtcaagagaggtgaaa
gaagtggatctctctgattatgcaaaactgatggtttcgttgttgcaaaatatgcatgca
aatgatcagaggtcaacaatgttgcaattagttgataaaatgaaaataaaacagaaggaa
ctaggttctgaattgaagcgagaggaaattgagcagctcatcttacaccttttattgggg
cggtttttgaaagaagaatttcagcatacagcttatgccacaaatgcctacattgccgtg
gggccgttggccaagcaaatactacaaggaaagaaaactgtgacgcttgagatttacact
gaacagagaactaatgcgggtggtgtaagatcagtgaagcgccgcagccttgggtcctct
ggtttggagctaaagcttgatgagctgagaaaagaactgtcctacgctggaggaatactc
ccacactcagtcttatccatggaacaaatcagcttattaagttcccaaaaaccgaattca
ctggaacagttggagaaggtaattggaaaattgaagacagaaatgtacggaaatagaata
cttgagcaaattcaaaagtattcggattccaagcccactgataaacaagaaactgatggt
agagcagcaaagaggtcaaagaccaagaaaaatcttgtgctcattgatagtagtgaagat
gaagaatga
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