Vigna unguiculata (cowpea): 114174296
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Entry
114174296 CDS
T06017
Name
(RefSeq) polygalacturonase At1g48100
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun00040
Pentose and glucuronate interconversions
vun01100
Metabolic pathways
Module
vun_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114174296
Enzymes [BR:
vun01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
114174296
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GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
114174296
NCBI-ProteinID:
XP_027914916
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Position
2:23245241..23248073
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AA seq
464 aa
AA seq
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MKRNKISSLFFISLLVIVFATFSTTVSVEARKTKKNVHKRNSHKDNGHGRGSHSPSCPTP
TPQGSMFDVLSFGAKGNGVSDDSEALVAAWDGACKVGGATVKIPAQFKFLIKPVTLQGPC
MPHLTLQIDGTLLAPPEASSWPTSSLFQWINFKWVHNFTIKGSGTVDGQGYNWWSSSEFY
DIQKKSYSKRIPSMKPTAIRFYSTNSVTVRDIRIINSPLCHLKFDNSKGIQVDNITISSP
ENSPNTDGIHLQNTQDVQIQRSIIATGDDCVSIQTGCSNIHVHHINCGPGHGISLGGLGK
DKSAACVSDIIVEDVSMKNTLYGARIKTWQGGFGMVKNVSFSRIQVYDVMFPIMIDQYYC
DKQKCKNETSTVVISGVKFDKISGSFGMQPVHIACSSSIPCTDVDLTDIELSPSPKYKGF
QEAVCWNSYGKSQGPLLPSSIDECLKSGGGLIKRIARSHDRVCY
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaacaaaatttcctcactctttttcatctccttgttggtgattgtctttgcc
accttctccaccacagtttctgtggaagcaaggaagactaagaaaaatgttcacaaacgt
aacagtcataaagacaatggccatggtcgagggtcacattctccatcatgtccaacacca
acccctcaagggagcatgtttgatgttttgtcttttggtgccaagggtaatggagtttct
gatgattcagaggcacttgtagctgcatgggacggtgcatgtaaagttggtggtgctaca
gttaaaattccagcacagttcaagttcctcatcaaacctgttactttacaaggcccttgt
atgccacaccttactcttcagattgatggaactctgttggcacctcctgaagcatcttct
tggccaacatcaagtttgtttcagtggataaatttcaagtgggtacacaacttcaccatc
aaaggttctggcactgttgatggccaaggctataactggtggagttcctcagaattttat
gacatacagaaaaagagctattcaaaaagaattccaagcatgaaaccaacagctataaga
ttttactccaccaactctgtcacagttcgtgatatcagaatcataaacagtcctctgtgc
catctaaaatttgataactcaaagggtatccaagttgacaacattacaatatcctcccca
gagaatagcccaaacactgatggcattcacttacagaacacacaggacgtgcaaattcaa
cgttctatcatcgcaacaggagatgactgtgtatccatccaaaccggttgctctaatatt
catgtccaccacattaattgtggccctggacatggtataagcttgggaggattagggaag
gacaagagtgcagcatgtgtgtctgacatcattgttgaggatgtctctatgaaaaacact
ctttatggagcaaggatcaaaacatggcagggaggctttggtatggttaagaatgtgtca
ttttccagaattcaagtgtacgatgttatgtttccaataatgatagaccaatactattgt
gacaagcaaaagtgcaagaatgagacaagcacagtggtgatttctggggttaagtttgat
aaaataagtggaagttttggaatgcagcctgttcatatagcttgcagcagttccattcca
tgcacagacgttgatttaactgacattgaactgagtccatctcctaaatataaaggtttt
caagaagctgtgtgctggaactcttatggaaaatcacaagggccattgctaccttcaagc
attgatgagtgcttgaaaagtggtggtggactaatcaagaggattgcaaggtcacacgat
agagtttgttactga
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