Vigna unguiculata (cowpea): 114174991
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Entry
114174991 CDS
T06017
Name
(RefSeq) DNA topoisomerase 3-beta isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03440
Homologous recombination
vun03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114174991
03460 Fanconi anemia pathway
114174991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vun03032
]
114174991
03400 DNA repair and recombination proteins [BR:
vun03400
]
114174991
Enzymes [BR:
vun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
114174991
DNA replication proteins [BR:
vun03032
]
Eukaryotic type
DNA Topoisomerases
114174991
DNA repair and recombination proteins [BR:
vun03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
114174991
FA (Fanconi anemia) pathway
114174991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
114174991
NCBI-ProteinID:
XP_027915541
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All DBs
Position
1:complement(41653880..41663973)
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AA seq
863 aa
AA seq
DB search
MAPPIPKVLMVAEKPSIALSIASVLSRAQMFTRRGSTEVHEFEAKFLGSPAYFKVTSVIG
HVFSVDFPAKYQDWSATDPLDLFQAQVIKNESNPKAHICRHLSQEARGCRYLVLWLDCDR
EGENICFEVIQCTGFKTNDTYRARFSSVTEKDVVKALDNLVRPNKDEAMAVDARQEIDLK
VGVAFTRFQTGYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQINTFKPEKFWSLHPYI
IQNGYEIQLEWHRGRLFDINVAMMFQKLVSEDGLLEVTEISEKQETKSRPVGLNTVNLLK
VASSALGFGPQMAMQIAERLYTQGFISYPRTESTAYPPSFDFRGVLSAQTNNPTWGNYVH
GLLTTGYQKPRLGTDVGDHPPITPMRSAAEDMLGNDAWKLYQYICQHFIGTVSPDCKYIR
KKVEFSIGGEAFHCTGQHVVTKGFTSIMPWLALNDKNIPSFVKGQKIEVSKLELYEGSTS
APDYLTESELISLMEKNGIGTDASIPVHINNICERNYVQVQAGRKLVPTPLGITLVRGYQ
TIDPDLCLPDIRSFIEQQITLIAKGQVDHRHVVQHVIQQFTQKFSYFVKKIEDMDALFEA
QFSTLTDSGRILSKCGKCLRYMKYISTQPSRLYCGTCEEVYYLPQKGTIKLYKELSCPLD
NFELLICSTPGPDVKSFPLCPYCYSNPPFEGIEALINTAKTGNAGKIGKGSGMPCSLCPH
PTCPNSLVSQGVCACPECSGTLVLDPISAPRWKLCCNMCNCLVFLAQGAHRISTTKERCG
ECDSSIIEVDFNKKTTPLEDGATLHRGCILCDELLHSLVEMKHGRSFKHMSSRGRGRGAR
KGGRGRGRGGGKVMDPKMSFRDF
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcccattccgaaagttctgatggtcgcagagaagcctagcatcgctctctcg
attgcttctgttctctctcgcgctcagatgtttacgagaaggggaagtacggaagttcat
gaatttgaagcaaagtttcttggatcgcctgcatattttaaagtaacatcagttattggg
cacgtattcagcgtagattttcctgctaaataccaagattggtcagccacagatccgtta
gatctctttcaggctcaggttataaagaatgagtcaaacccaaaggcgcatatttgtaga
catttaagtcaagaagctcgtggatgtcgttatttggtattatggttagattgtgatcgt
gaaggagaaaatatatgttttgaggttatacagtgcactggtttcaaaacaaatgacact
taccgtgcacgcttctcttctgttactgagaaagatgttgtgaaggccttagacaacctt
gtcagaccaaataaagatgaggcgatggctgtagatgctaggcaagagatagatctgaaa
gttggagttgcgttcactcgatttcaaacgggttatttccagggaaaatatgggaacctg
gattccagggttatctcctatggaccctgtcagactccaaccttaggattttgtgtgcag
cgatatttacaaataaacactttcaagccagaaaagttttggagtttgcacccttacata
attcaaaatggctatgaaattcagctagaatggcatcgtggcagattgtttgacataaat
gttgctatgatgtttcaaaagcttgtttctgaagatggacttttggaagttactgaaata
tcagaaaaacaggaaaccaaaagtcgtcctgttggtctaaacacagtgaaccttctaaag
gttgcttcaagtgctctaggatttggacctcagatggctatgcaaatagctgaacggttg
tatactcaaggtttcatcagctatccacgcacagaaagcacagcataccctccttcgttt
gactttcgtggtgtcctctccgcacaaacaaataatccaacatggggtaattatgtacac
gggctacttaccactggttatcaaaaacctcgtctgggaacagatgtaggtgaccatcct
cccattaccccaatgagatcagcagcagaagatatgctgggcaatgatgcttggaagctg
taccaatatatttgtcagcactttataggtacagtttctccggactgcaagtatataagg
aaaaaggttgagttttccattggcggagaggcctttcattgtacagggcagcatgttgtc
accaaaggatttacttctataatgccttggttggcgttaaatgataaaaatattccatca
tttgtaaaaggccagaaaatagaagtatcaaagttggagctctatgaggggagtaccagt
gctccagattacctaactgaaagtgagctgatatccctgatggagaagaatggaatagga
acagatgcttcaattcccgtacatattaacaacatatgtgagcggaattatgtgcaggta
caagcaggcagaaagcttgtcccaaccccattaggcattacattagtaagaggttatcaa
actatagatccagatctctgcctgcccgatattcgtagcttcattgagcagcaaattact
cttattgccaagggtcaggtagatcatcgacatgtggtacagcatgtaattcaacagttc
acgcagaagtttagttactttgtcaaaaagattgaagatatggatgcattatttgaagca
cagttttctacgcttactgattcagggcgtattctgagtaaatgtggtaaatgcttgaga
tatatgaagtacatttctactcagccttcacgattgtattgtggtacatgtgaggaggtt
tattatctcccacagaagggaaccatcaagctgtacaaagaattgtcttgtcctttagac
aattttgaacttttaatttgctccacgcctggcccagatgttaaatcattcccactatgt
ccatactgctacagtaatcccccattcgaaggcattgaagcactcatcaataccgctaaa
actggtaatgctggcaagattggcaagggatctggcatgccctgcagcctatgccctcat
cccacttgcccaaattctctggtttcccagggtgtatgtgcttgcccagagtgcagtgga
acacttgtcttagacccaataagtgctcccagatggaaactttgttgtaatatgtgtaat
tgcctagtttttcttgcacaaggcgcacacagaatctccacaactaaagagaggtgcggt
gaatgtgactcttcaatcatagaagtagacttcaacaagaaaacaactcctctggaagac
ggagcaaccttacaccgaggctgcattctatgcgatgagttgcttcattccctcgtggaa
atgaaacatggtagaagtttcaagcacatgagctcaagaggaagaggtagaggagcaaga
aaaggtggaaggggccgaggacgcgggggtggaaaagtgatggatccaaaaatgagcttc
cgagatttttaa
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