Vigna unguiculata (cowpea): 114175136
Help
Entry
114175136 CDS
T06017
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 6-like
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114175136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vun03019
]
114175136
03036 Chromosome and associated proteins [BR:
vun03036
]
114175136
Enzymes [BR:
vun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114175136
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
114175136
mRNA degradation factors
5'-3' decay
Decapping complex
114175136
Chromosome and associated proteins [BR:
vun03036
]
Eukaryotic type
Gene silencing
piRNA pathway
114175136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
NOD
Presenilin
CMS1
Motif
Other DBs
NCBI-GeneID:
114175136
NCBI-ProteinID:
XP_027915709
LinkDB
All DBs
Position
1:complement(25985918..25988922)
Genome browser
AA seq
261 aa
AA seq
DB search
MFFHCTFFLRRYTRFSAFFVLASVAGSILVSLLQRFSTPLDADVTVTKGNEFEDYYLKRE
LLMGIYEKGFERPSPIQKESIPIALTGSDILARANKGTDKIAAFCIPGLEKIDQDNNVIQ
VVILVPTTELALQTSQVCRELGKHLKIQVMVTTGVTSLTHDIMRLYQPVHLLVGTPGRVL
DLVKKGVCILKYCSMLVMDEADKLLSPVFQPSIEQLIQFLPESRQILMFSATFPVNVKDF
KDRYLRKPYVINITDELTLKG
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgttctttcactgtactttcttcctccgccgctacacgcgcttctccgccttctttgtc
ctcgcctccgtggccggatccatcctcgtctccctactccagcgcttctccacccccctc
gatgcggatgtgacagttactaaaggaaatgaatttgaggattactatttgaagcgtgag
ctgcttatgggaatatacgagaagggttttgagaggccatctcctatccaaaaagaaagc
attcccattgctcttactggtagtgacattcttgctagggctaataaaggaacagacaaa
atagctgcattttgcattcctggattggaaaaaattgatcaggataataatgttattcaa
gttgtaatattggtcccaactacagagctggctttgcaaacatcccaagtgtgtagagaa
cttggaaaacatttgaaaattcaagttatggttacaacaggtgttaccagcctgacacat
gatattatgcgtttatatcaaccagttcatctgctagttggaactccaggaagagtatta
gatcttgtaaagaagggtgtttgcattctgaaatattgctctatgcttgttatggatgag
gctgataagcttctctccccagtgttccaaccttcaatagaacagcttattcaatttctt
cctgaaagccgtcaaattctgatgttttctgctacatttcctgttaatgttaaggacttc
aaagatagatatctacgcaagccatacgttattaacattacggatgagctaactctgaaa
ggttga
DBGET
integrated database retrieval system
