Vigna unguiculata (cowpea): 114175416
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Entry
114175416 CDS
T06017
Name
(RefSeq) recQ-mediated genome instability protein 1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
114175416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vun03400
]
114175416
DNA repair and recombination proteins [BR:
vun03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
114175416
FA (Fanconi anemia) pathway
114175416
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Gene cluster
GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Cas_Csm6_CARF
Motif
Other DBs
NCBI-GeneID:
114175416
NCBI-ProteinID:
XP_027915983
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Position
3:complement(3949085..3953043)
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AA seq
621 aa
AA seq
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MPVRRLRLDSDTDEEEQHPLQPQSQPRPQPQPHFPAVPVEISDDEDFIDVAESLSPPSPS
CPVSDFLRRLGLSLKRDWLASCLRQLQASVASFEHLDVAAKAKRCFEQFLFADMNSCGAG
VLPPNVDSMHLRVLPGPYVLQVDEIINITCNLRGRYEQAPPGPKRCLKLSMTDGVQRVFG
MEYRPIKALEVCASSGLKVAISNVHVRRGLLMLVPETIEILGGLVEELDAARKRLVEEIN
KPPRGKRNKNGELPPLATRATLAAWPPGGVDNRACNGSTLHSNVSFQENNQGAGQSIPSP
VNNLPTEDTLSMGARSAASNSIPCMSSHSNAMNVDTPRNTDPVSHASPMSNQLSSVISRA
KDMHIDASNARECSIDHQYSNMDSNVAAAHMDSVNITRENSVGIECSPVVVNIDTDTDRT
PVATDTTHLQRTSSTVLDTSDVQMVDAIDHPLILSRDQEVPFTYIASLSAKWAKIKEEAP
SVQGKIKCFLTGVKGFQFKKRTTYELQAYVDDGSLISEILVDHNVVEKGIGYSPEEVTAA
LSSPDTKIVHQMKDTMRKFQAFLANFEGIILVEFNKKSPLPLALEMSQGCPQSDAWLLLR
RLKSLQPALVQNPTDPIELSP
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgcgccgtctcagactcgattccgacaccgacgaagaagaacaacacccactc
caaccccaatcccaaccacggccacagccacagccacattttccggcggttcccgttgaa
atctccgacgatgaagacttcatcgacgtcgccgaaagcctctccccgccctccccttcc
tgtccagtctccgacttcctccgccgcctcggtctgtctctcaagagagactggctcgcc
tcctgtctccgccaactccaagcctctgttgcgtccttcgaacacctcgacgttgccgcc
aaagccaaacgttgtttcgagcagttcctcttcgccgacatgaattcatgtggcgccggc
gttctccctcccaacgtcgattccatgcaccttcgcgttctccctggtccctacgttttg
caggttgatgaaataattaatatcacttgtaacctacgaggaagatacgaacaagcacct
cctggacctaagaggtgcctcaagttgtcaatgactgatggtgttcagagagtatttgga
atggagtataggcctatcaaagcgcttgaagtttgtgcctcttctggtttaaaggttgct
atctctaatgtacatgtgcgtcgtggacttctaatgttggtccctgaaaccattgaaatt
ttggggggattggttgaggagctggatgctgctcgaaaacgactggttgaagaaataaac
aagccacctagggggaaaagaaacaaaaatggagagctccctcctttagcaactagagca
acacttgctgcatggcctccaggtggggttgataatcgtgcgtgcaatggctccacgctg
cacagtaatgtttctttccaagaaaacaaccaaggtgctggccagagcatacctagccct
gttaacaacttaccaactgaagatactttgtccatgggtgcacgcagtgctgcttctaat
tcaataccctgcatgtcatcacattccaacgccatgaatgtggatacgcctaggaatacc
gatcctgtatcccatgctagtcctatgtctaaccaactctcttctgtaatctcaagggcc
aaggatatgcacatagatgcttctaatgcaagggaatgttctattgaccatcagtattct
aacatggattcaaatgttgcagcggcacatatggactcagttaatataacacgagaaaat
tctgtaggtattgagtgctctcctgttgttgtcaatattgacacagatacagatagaact
cctgttgctacagatactactcatctgcaaagaacctcatccactgttttagacactagc
gatgtccagatggttgatgccattgaccatccactcatactgtctagagaccaagaggtt
cctttcacatacatagctagtttgtcagctaagtgggctaaaatcaaggaggaagctcct
tccgttcaggggaaaatcaagtgctttttgactggtgtaaaaggattccagtttaagaaa
aggacaacatatgaacttcaggcatatgtagacgatggtagccttatttctgaaatcctt
gtcgatcataatgttgtagagaaaggaattggttattctcctgaggaggtaactgcggct
ctttcttctcctgacacaaaaatcgtacaccaaatgaaggatacaatgcgtaaatttcaa
gcctttttagcaaactttgagggaataattcttgtggaattcaataaaaaatctcccctt
ccacttgctctagagatgagtcaaggttgtccgcagtctgatgcatggttacttctgaga
aggctgaagtctcttcaacctgcactagttcaaaaccctacggatccgattgagttatcc
ccgtaa
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