Vigna unguiculata (cowpea): 114175639
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Entry
114175639 CDS
T06017
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114175639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vun03021
]
114175639
Transcription machinery [BR:
vun03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
114175639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
Motif
Other DBs
NCBI-GeneID:
114175639
NCBI-ProteinID:
XP_027916210
LinkDB
All DBs
Position
3:64451408..64459255
Genome browser
AA seq
538 aa
AA seq
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MSIDLLLKPTCGGCGSTTDLYGSNCKHMTLCLTCGKSMAENKAKCVDCGVTVTRLIREYS
VRATSGSDKHYFIGRFVSGLPDFSKKKSAENKWALQKEGLQSRQVTDALREKYKNKPWLL
EDETGQSQFQGHLEGAQSATYYLLMMERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
KNRKKTADGYERWMMKAANNGPAAFGERGRFDEKESIAGGRGKSSKKTDDDEGHVSDKGE
EDEDGEVGRRSRLGLNKKGGDDDDEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEAVGN
NPEEREDLASEVPAPPEIKQDDEDEDEENEEGGGLSKSGKELKKLLRTSSLNESDAEDDD
YDDDVDDEAGLPPVIVSKQKGAPKEEPTDNSPSKPAITGTVRGTVSTSKPSKGKRKFNEE
TKSTNGAPPKKVKIENEPKSTVKDENGSASKNNAPAKGVPPAPSSKGGSSPIVSGPVSEE
EIRAVLMQKTPLTTQDLVAKFRARLRSPEDKKAFADILKRISKIQKTNTSSYVILRDR
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattgacctgctattgaagccaacgtgtggcggatgtggttcaaccaccgatctt
tatggaagcaattgcaaacacatgactctgtgcttgacctgtggcaagagcatggcggag
aacaaggcaaaatgcgttgattgtggcgtcaccgttactcgcttgattcgagaatatagc
gttcgcgctacctctggcagtgacaaacattatttcattgggagatttgtatctggtttg
cctgacttttcgaaaaagaaaagtgctgaaaacaagtgggccttgcagaaggagggatta
cagagccgccaagtcaccgatgctttgcgggagaagtacaagaacaaaccatggctcttg
gaagacgaaactggtcagtctcaattccagggtcatctcgaaggtgcacaatcagctacg
tattacctgctaatgatggaaagaaaagaatttgttgccattcctgctggttcttggtac
aactttaacaaggttgcacaatataaacaattgacactggaggaagcagaagagaaaatg
aagaacagaaagaaaactgctgatggatatgaaagatggatgatgaaagcagcaaataat
gggccagctgcatttggtgaacgtggtaggtttgatgagaaggagagcattgcaggcggg
agagggaaaagcagtaagaaaactgacgatgatgaaggccatgtatcagataaaggagaa
gaggatgaagatggggaggtaggaaggaggagtagacttggactaaacaaaaaaggtggt
gatgatgatgacgaaggtccaaggggaggagaccttgatctggatgatgatgacatcgaa
aagggtgatgattgggagcatgaagagattttcactgatgatgatgaagctgttggcaac
aatcctgaggaaagggaagatttggcttctgaagttcctgctcctccagaaatcaagcag
gatgacgaggatgaagatgaagaaaatgaagaagggggaggtctgagtaaatctgggaaa
gagctgaagaagctgctacgtacaagtagtctaaatgaatctgacgctgaagatgatgat
tacgatgatgatgtggatgatgaggctggccttcctcctgtgattgtttcaaagcagaag
ggtgcacctaaggaagaacccactgacaatagcccttcaaaacctgcaataacaggaact
gttcggggaactgtatccacttcaaagccttcaaaggggaagagaaaattcaatgaggaa
acaaaatccactaatggtgcaccaccaaagaaggtcaaaatagaaaatgaaccaaaatca
actgtcaaagatgaaaacgggtctgcatctaaaaataatgctcctgcaaaaggtgtacca
ccagcaccatcatctaaaggtggttcttcccccattgtttctggacctgtgagtgaggaa
gaaatcagggctgttttgatgcagaagactccattgaccacacaggatcttgttgctaaa
ttcagagcaaggctaagaagtccagaggataaaaaggcttttgcggatatcctgaagaga
atctccaagatacagaaaactaatacatccagttatgttatattgagagataggtga
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