Vigna unguiculata (cowpea): 114175829
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Entry
114175829 CDS
T06017
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03013
Nucleocytoplasmic transport
vun03015
mRNA surveillance pathway
vun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114175829
09122 Translation
03013 Nucleocytoplasmic transport
114175829
03015 mRNA surveillance pathway
114175829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vun03019
]
114175829
03041 Spliceosome [BR:
vun03041
]
114175829
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114175829
Spliceosome [BR:
vun03041
]
Complex C
Other components
EJC/TREX
114175829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
114175829
NCBI-ProteinID:
XP_027916450
LinkDB
All DBs
Position
1:complement(40609068..40612929)
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AA seq
710 aa
AA seq
DB search
MSPKYQTLDNRPINQWKVTELREELRRRRLNTKGLKDDLVKRLDECLRLERESEQDSEEE
ANGFDDGHVDGEKDSAAVTMDAKVVDATDKESTQTFETAEKGKSDVVEPIETKNEEKFPG
VVDEDSNKNDKQGGIAGQVDINNSVSTMDEEVEHEGFPSGVDSGNVVEEAASTHASTVET
TITVTESVVTGVVVSGEDTYCAEKNNEFSAAKLENDEESKAQLDGEDTKPQLDSETKPLH
EDIVPDSSVPENQVSEVNPSLGSQVKSDSISTDSVSINQKNELKDTIITDNVKLEQDIVK
PEMVEEPSSRNDVPVSYDESHAMDVGGRHEKKTSVEENINNVSSPDLNKTNSSDDVGYPE
KLNLDRSSGDDSMEEDLPETKQIDSKFNVDELRKKVESIEEPIVKEESRTIAVGDGVSGG
KNDTHQDIDISPVAPTEKRKFHEQISVGNNEPAKRQRRWNTETVKGPDPQSTTPRPATTP
RDEPIALKRNLSRSDSTATDDTPKERIVPPSQRSPTNSLRIDRFLRPFTLKAVQELLGKT
GNVSSFWMDQIKTHCYVTYSSVEEAMETRNAVYNLQWPPNGGRLLVAEYVDPEEVKMKLE
PPVQAAPISTAPVVPPVVPTSQPEPSPRLHREQHSVPTMLPPPPPLSKNPPVARDRLPSP
PPLPEKVDPPIVTLDDLFRKTISTPRIYYLPLSEEQVTAKLAAQGKSVRQ
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccaaaatatcagactctggacaatcgtccaattaaccagtggaaggttacggag
ttgagagaggagctgaggaggaggaggttaaacaccaaaggtttgaaggatgatttggta
aagcggttggatgaatgccttcgtcttgaaagggagagtgagcaggattctgaggaggag
gccaatggttttgatgatggtcatgtagacggggaaaaagattctgcggcggttactatg
gatgctaaagtcgttgacgcaactgacaaggaaagtacccaaacatttgagacagctgaa
aaggggaagagtgatgtagttgaaccgattgaaacaaaaaatgaggaaaagtttccgggg
gttgtggatgaagacagcaataagaatgacaagcagggtggtattgctggccaagttgac
attaataatagtgtgtcaaccatggatgaagaagttgaacacgagggctttccctccggt
gtagattctggaaatgtggtagaggaggccgctagtactcatgcttctactgtagagacc
acaattacagtcactgaaagtgtagtaacaggagtggtagtcagtggtgaggatacatac
tgtgcagaaaagaacaatgagttttctgcagcaaagctagagaatgatgaggagtcaaag
gcgcagctggatggtgaggatacaaagccccaactggattctgagacaaagcccctgcac
gaggatattgtgcccgactcttctgttccagaaaaccaggtatctgaggtcaaccctagt
ttagggtctcaagtaaaatctgattctatttctactgattctgtgtcaattaatcaaaag
aatgaactaaaggatactataattactgataatgtcaaattagaacaagatattgttaag
ccggagatggtggaagaaccatcatccagaaatgatgtacctgtttcttatgatgaatca
catgcaatggatgttggagggcggcatgagaaaaagacatctgttgaagaaaatatcaat
aatgtttcaagtccagatttgaataagaccaatagcagtgatgatgtggggtatccagaa
aagttgaatttagacagaagttctggtgatgattccatggaagaggatttgcctgagact
aagcaaattgattctaagtttaatgttgatgaacttagaaagaaagtggagagtattgaa
gagcctattgtgaaggaggagagtaggactatagcggtgggagatggtgtatctggagga
aaaaatgatacccaccaagatattgacattagtcccgttgccccaactgagaaacgaaaa
ttccatgaacaaatatcggttgggaacaatgagcctgcaaaaaggcaacgcaggtggaac
actgaaacagttaaaggtccagatccacaaagcactactcccaggcctgctactacacct
agagatgaaccaattgctctgaaacgcaacctctctaggtctgattccactgctactgat
gacacacctaaagagcgcattgttccaccatcacaaaggtccccaactaattccctcagg
attgatcgattcctccgtccatttactctgaaagctgtgcaagagcttcttggtaagact
gggaatgtcagcagtttctggatggaccaaataaagacccattgctatgttacttactca
tctgttgaagaagccatggagacacggaatgctgtgtataatttgcaatggccaccaaat
ggtgggcgtctcttagttgctgagtatgttgatcctgaagaagtgaaaatgaagttagaa
cctcctgtacaggctgcccccatcagcactgctccagtagttccgcctgtggtccccaca
tcacagccagagccttcccctcgactgcacagggagcagcattcagttccaactatgctc
ccacctccaccaccattgtcaaaaaacccaccagttgcaagagatcggcttccatcacca
ccacctcttcctgagaaagtcgacccacctattgtcactctggatgatctcttccgcaaa
accatatcaactcctcggatctactacttgcctttatccgaagagcaagttactgcaaaa
cttgctgcacagggtaaaagcgtgaggcagtag
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