KEGG   Vigna unguiculata (cowpea): 114176356
Entry
114176356         CDS       T06017                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
vun  Vigna unguiculata (cowpea)
Pathway
vun03030  DNA replication
vun03410  Base excision repair
vun03420  Nucleotide excision repair
vun03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vun00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    114176356
   03410 Base excision repair
    114176356
   03420 Nucleotide excision repair
    114176356
   03430 Mismatch repair
    114176356
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vun03032]
    114176356
   03036 Chromosome and associated proteins [BR:vun03036]
    114176356
   03400 DNA repair and recombination proteins [BR:vun03400]
    114176356
DNA replication proteins [BR:vun03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    114176356
  DNA Replication Termination Factors
   ELG1-RFC complex
    114176356
Chromosome and associated proteins [BR:vun03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    114176356
DNA repair and recombination proteins [BR:vun03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     114176356
  Check point factors
   HRAD17(Rad24)-RFC complex
    114176356
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 AAA_22 Mg_chelatase AAA_16 Rad17 Viral_helicase1 RCF1-5-like_lid RuvB_N AAA_11 AAA_24 AAA_19 nSTAND3 AAA_assoc_2 AAA_30 AAA_28 DNAX_ATPase_lid ABC_tran AAA_5 AAA_18 IstB_IS21 NTPase_1 MeaB RNA_helicase bpMoxR AAA_25 T2SSE DNA_pol3_gamma3 AAA_3 AAA_7 KTI12 NPHP3_N
Other DBs
NCBI-GeneID: 114176356
NCBI-ProteinID: XP_027917184
LinkDB
Position
3:complement(50520915..50524285)
AA seq 330 aa
MSSSSSSNIYDMPWVEKYRPSKIADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT
SILALANELIGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEAD
SMTTGAQQALRRTMEIYSNSTRFALACNTSAKIIEPIQSRCAIVRFSRLSDQEILGRLMI
VVQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQANVFKVCDQPHPLHVK
NMVRNVIEGNFDEACSGLKQLYDLGYSPTDIITTLFRIIKSYDMAEYLKLEFMKETGFAH
MRICDGVGSYLQLCGLLAKLSLVRETAKAV
NT seq 993 nt   +upstreamnt  +downstreamnt
atgtcatcgtcttcctcaagcaacatctatgacatgccatgggtagagaagtatcgtccc
agcaagatcgctgatatcgtcggcaacgaggacgctgtctccagattgcaagtcattgct
cgcgatggcaacatgcccaatctcatcttatcaggtcctcctgggaccggaaaaaccact
agcatactagccctcgctaacgagcttatcgggccaaattgcaaggaaggtgttcttgaa
cttaatgcttctgatgatagaggaattgatgttgtgaggaacaagatcaagatgtttgct
cagaagaaagtgaccctcccccctgggaggcacaagattgtaatactggatgaagctgat
agtatgaccacaggggcacaacaagcattgaggaggacgatggagatatattctaactct
actcgttttgctcttgcttgcaatacctcggctaagattattgagcccattcagagtaga
tgtgccatagtgcggttttcacgattgtctgatcaagagatacttggtcgactcatgatt
gtggttcaagccgagaaggttccctacgttcctgaaggacttgaagccatcattttcact
gccgatggtgatatgaggcaggcattgaataacttgcaagcaacatacagtgggttccaa
tttgttaaccaagcaaatgtttttaaggtttgtgaccagccacatccactgcatgtgaag
aatatggtgcgtaatgtgattgaagggaactttgatgaggcttgttcgggcctcaagcaa
ctatatgatttaggatattctcccactgatatcatcacgaccctttttcgtatcataaaa
agctatgatatggctgagtatctgaaattggaattcatgaaggaaactgggtttgctcat
atgagaatttgtgatggtgttggatcttatcttcaattgtgtggtttattggctaagctt
tccctagttcgagagacggctaaagctgtatga

DBGET integrated database retrieval system