Vigna unguiculata (cowpea): 114177191
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Entry
114177191 CDS
T06017
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
114177191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vun03400
]
114177191
DNA repair and recombination proteins [BR:
vun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
114177191
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
Motif
Other DBs
NCBI-GeneID:
114177191
NCBI-ProteinID:
XP_027918248
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Position
3:54918870..54927946
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AA seq
940 aa
AA seq
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MAENVDLTNKLPELKLDSKQAQGFLSFFKTLPDDPRAIRLFDRRDYYTAHGDNATFIAKT
YYHTTTAMRQLGNGSNALSSVTVSRNMFETIARDLLLDRTDHSLELYEGSGSNWRLVKTG
TPGNIGSFEDVLFANSEMQDSPVIVALSLNFRENGCTIGLGFVDLTKRVLGMAEFLDNHF
TNVESALVALGCKECLLPIESVKSTEYRMLCDVLTKCGVMLTEKKKYEFKARDLVQDLGR
LVKGPIEPVRDFVSGFEYAPGALGALLSYAELLADESNYENYTLRRYNLDSYMRLDSAAM
RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHIWLKQPLVDVAEINSRLDIVQAFV
EDTVLRQDLRQHLKRISDIERLVHNLQKRRAGLQHIVKLYQSSIRLPFIKSALEIYDGQF
SSVMRSRYLEPLHLWTDDEHLNKFIGLVEASVDLDQLENREYMISPSYDSTLANLKEQRE
LLESQIHNLHRQTADDLDLPIDKALKLDKGTQFGHVFRITKKEEPKIRKKLNTQFIVLET
RKDGVKFTNTKLKKLGDQYQQILEEYKNCQKKLVDKVVQTATTFSEVFESLAEIISELDV
LLSFADLASSCPTPYTRPDITPSDEGDIILEGCRHPCVEAQDWVNFIPNDCKLVREKTWF
QIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDKASISVRDCIFARVGAGDCQLRGVST
FMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHIVEVIKAPTLFATHF
HELTALALENVSNDPQKQIVGVANYHVSAHIDSSTRKLTMLYKVEPGACDQSFGIHVAEF
ANFPESVVTLAREKAAELEDFSPPAASLTDTTQEVGSKRKRVFESDDVSQGTARARQFLE
TFVDLPLVTMDKMQALQEVRKLTENLEKDAENCNWLKQFL
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaatgtcgatctaaccaataagctccctgagctcaaattagattctaagcaa
gcacaagggtttctatcatttttcaaaaccctacctgatgatccaagggctatacgactt
tttgatcgtagggactattatactgcccatggcgacaatgcaactttcattgcaaagacc
tactaccacactacgactgccatgcgacaactgggcaatggatcaaacgctctttccagt
gttactgtcagcagaaacatgtttgaaacaattgctcgtgatctccttttggatagaaca
gatcattctcttgagctctacgaaggtagtggttctaattggagactggtcaaaactgga
acgcctggtaatattggtagttttgaagatgttctgtttgctaacagtgaaatgcaagat
tctcctgttattgttgctttgtcacttaacttccgtgaaaatggttgcaccattgggtta
ggatttgttgatctaactaagagagtgcttgggatggctgaattccttgacaatcacttc
acaaatgtggaatcagcattggttgcactcggctgcaaagagtgtcttctgcccatagag
tctgtcaaatctactgaatacagaatgttgtgtgatgtgttgactaaatgtggtgtgatg
ttaactgagaaaaagaaatatgaatttaaagccagagatctggtgcaggatcttggtagg
cttgttaaaggtcctatcgaaccagttcgagattttgtgtctggatttgaatatgcacct
ggtgctctgggggcattactatcttatgcagagttactggcagatgaaagcaattatgaa
aactatacccttcgtaggtacaatcttgacagctacatgaggttagattctgcagccatg
agagcacttaatgtcctggaaagcaaaactgatgcaaacaaaaatttcagtttgtttggt
ctcatgaataggacttgtactgctggaatgggaaaacggttattgcacatctggcttaaa
cagccattagtagatgtggcagaaattaattctagattggacatagtacaagcatttgta
gaggacactgtgcttcgccaagatctgaggcagcatctgaaaagaatatcagacattgag
cgactggtgcacaatctgcagaagcgacgagctggtctgcaacatattgttaaactttac
cagtctagtattcgactacctttcattaaaagtgctttggaaatatatgatgggcaattt
tcctcagtgatgagaagtaggtatttggaacctcttcatttatggactgatgatgagcac
ctgaacaaattcattgggcttgtagaagcttctgttgaccttgaccaactggagaacagg
gaatacatgatttctccaagctatgactctacacttgctaacctaaaggaacagcgagaa
ttactagagagccaaatacataacttgcatagacaaactgctgatgatcttgatctgcct
atagataaggcattaaagttagacaaaggcacacaatttggacacgttttcagaatcaca
aagaaggaagagccaaagataaggaagaagctcaatacccagtttattgtactggaaacc
cgtaaagatggagtgaaatttaccaacacgaagctcaaaaaactaggggatcagtatcaa
caaattcttgaggagtacaaaaattgtcaaaagaagttagttgataaggtagttcaaaca
gcgacaactttttctgaggtgtttgaatctttagctgaaataatctctgaattggatgta
ttactgagctttgctgatttagcttctagttgcccgacgccctacacaaggcctgatatc
actccatcggatgaaggagatattatcttagaaggctgcagacacccttgcgtggaagcc
caagattgggtgaattttataccaaatgattgtaagcttgtcagagaaaaaacttggttt
caaataataacggggcctaacatgggtggtaaatcaacattcattcggcaggtgggtgtg
aatattttgatggcacaagttggttcatttgttccttgtgacaaagccagcatatctgtt
cgtgattgtatttttgcccgtgtgggtgctggtgactgccaactacgtggtgtttctacc
ttcatgcaagaaatgcttgaaactgcatcaatattaaaaggagcaactgaaaagtctttg
ataatcattgatgagttggggcgtgggacatcaacctatgatggatttggtctagcttgg
gccatttgtgagcatattgttgaagttatcaaagcacctactttgtttgccacccacttt
cacgagctgactgctttagcccttgaaaatgtaagcaacgatccacagaagcaaattgtt
ggcgtggcaaactatcatgttagtgcgcatattgactcatcaactcgaaagctaactatg
ctatataaggttgaacccggagcatgtgatcagagttttggtattcatgttgcggagttt
gctaacttccctgaaagtgttgttaccctagctagagaaaaggcggcagaattagaagac
ttttctccccctgcagcatccctaactgatactacacaggaggtgggttctaaacgtaag
agagtttttgaatccgatgacgtgtctcaagggactgcaagggcacggcaatttctcgaa
acatttgttgatttgccactggtgaccatggacaaaatgcaagcattgcaagaagtaagg
aagttaacagaaaatttggagaaggacgccgaaaactgtaattggctgaagcaattcttg
taa
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