Vigna unguiculata (cowpea): 114177714
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Entry
114177714 CDS
T06017
Name
(RefSeq) paired amphipathic helix protein Sin3-like 4
KO
K11644
paired amphipathic helix protein Sin3a
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vun03036
]
114177714
Chromosome and associated proteins [BR:
vun03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
114177714
REST complex
114177714
Heterochromatin formation proteins
Other heterochromatin formation proteins
114177714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
MC7
Motif
Other DBs
NCBI-GeneID:
114177714
NCBI-ProteinID:
XP_027918991
LinkDB
All DBs
Position
3:36067913..36079765
Genome browser
AA seq
1411 aa
AA seq
DB search
MKRSRDDAYMSPQHKRPMVSSRGEPSGQPQMMSGGGQRLTTNDALAYLKAVKDMFQDKRE
KYDDFLEVMKDFKAQRIDTTGVIARVKDLFKGHKDLILGFNTFLPKGYEITLPLEDEQPP
QKKPVEFAEAISFVGKIKTRFQSNDSVYKSFLDILNMYRKETKSITEVYEEVAALFQDHA
DLLEEFTHFLPDTSGTAFNHYASTRNPLLRDRSSAMPTVRQMHVEKRERNIASQGDRDFS
ADHPDPELDRGLIKADKDQRRRGEKEKESREEKDRRQRERDDRDYDHDGSRENLSHKRKS
ACRAEDSGAEPMHDTDENFGMHPVSYACEDKSSLKSMYSPVIGYLDKVKEKLPNPEDYQE
FLKCLNIYCKEIIARHELQSLVSNLLGKHADLMDGFDEFLSQCEKNEGFLAGLLKKVKSF
WHEGHGPKPMKLEDRDRDRDDGMKERDRRERDKSNAIANKDVSAPKMFQYGSKDKYSGKP
ISELDLSNCEQCTPSYRLLPKNYLIPPASQRTELGAEVLNDYWVSVTSGSEDYSFKHMRK
NQYEESLFRCEDDRFELDMLLESVNVATKRVEELLEKINANIIKGDSPIRIEEHLTALNL
RCIERLYGDHGLDVMDVLKKNASLALPVILTRLKQKQDEWARCRADFNKVWAEIYAKNYH
KSLDHRSFYFKQQDTKSLSAKVLLAEIKEISEKKRKEDDVLLAIAAGNRQPIIPHLEFVY
PDPEIHEDLYQLIKYSCGEMCTTEQLDKAMKIWTTFLEPVFGVPSRSQGPEDVVKDRNNS
AKSGTEVVAGDGSPVINPKNLNINRNGDENFPFEQSHSCKQWQPSGHAKVKKDNHLDSDS
FAQKTGALGSNTQQGKMNIDASIPDEVSRANKQDHSTERLVNADVSLSSAVEQNNRSTNV
DKATGLAATPLRPANISSVGGVGLASLEGADSARPVTSTNGAIIEDSKVHRHREESVGHF
RCEREEGELSPNGDFEEDNFAVYGHTSSDAVHKGKDSNISRPYQNRHGEVVRGEAGGEND
ADDEGEESPHRSLEDSENASENGDISGTESADGEECSREREEDGGHDHDDKAESEGEAEG
MADANDVEGDCASLPYSERFLVNVKPLAKYVPPTLHEKERIGRVFYGNDSFYVLFRLHQT
LYERIRSAKVNSSSSERKWRASNDTDSTDQYGRFLNALYNLLDGSSDSTKFEDDCRAIIG
TQSYVLFTLDKLIYKLVKQLQAVAADEMDSKLLQLYAYEKSRKPGRFVDLVCHENARVLL
HDENIYRIECSPSPTQLSIQLMDYGFDKPEVTTVSMDPNFSAYLHNDFLSVVPDKKEKSG
IYLKRNKRKNGSGDEFSSQTMDGLQIVNGLECKIACNSSKVSYVLDTEDLLYQTRRKKRR
SLHQSSSCLEQSNSSKISSSREQRVCKLFSN
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtcaagggatgatgcttacatgagtccacaacataaacggcctatggtgtct
tctagaggagaaccctcggggcaaccacagatgatgagtggtggtggtcagagactaacc
acaaatgatgccttggcatatctcaaggctgtaaaggatatgtttcaagataagagagaa
aagtatgatgactttctggaagtcatgaaggatttcaaggctcaaagaattgatacaact
ggtgtcatagcaagagtgaaggatctgtttaaagggcacaaagatctcattttaggattt
aacaccttcttgccaaagggatatgaaattacacttccattggaggatgaacaacctccc
caaaagaagcctgttgaatttgcagaagccataagttttgtgggcaagattaagactcgc
tttcaaagcaatgacagtgtttataagtcatttctagacatattaaatatgtatagaaag
gaaactaagtctatcactgaggtttacgaggaggttgctgcacttttccaggaccatgca
gatcttcttgaggagtttacgcattttcttcctgatacttcaggaacagcctttaatcac
tatgcttctactcgaaatcctctgcttcgtgataggagctctgcgatgccaacagtgagg
caaatgcatgttgaaaagagagagaggaacattgcttcacaaggtgatcgtgacttcagt
gctgaccatcctgatccagaacttgacagaggtttgatcaaggctgataaggatcagagg
aggcgtggggagaaggaaaaagaaagtagagaagagaaagacaggagacagcgggaaagg
gatgacagagattatgatcacgatggtagtagggaaaatttatctcacaagcggaaatct
gcttgtagggctgaagattctggcgctgaaccgatgcatgatactgatgaaaattttggc
atgcaccctgtctcatatgcatgtgaggataaaagttctttgaaaagtatgtatagtcca
gtgattggttaccttgacaaagtgaaggagaaattaccaaatcccgaggattaccaggaa
tttttgaagtgcctaaacatctactgcaaggaaataattgcccgtcatgaattgcaatca
ttggtgagcaatttgctgggaaaacatgcagaccttatggatggatttgatgaatttttg
tctcaatgtgaaaagaatgaaggattcctagctggtcttctaaaaaaagtaaaatccttt
tggcatgaaggacatggacctaaaccaatgaagctagaggacagggatcgtgatagggat
gatgggatgaaagaaagggatcgtagagaaagggacaaatccaatgcaattgctaacaag
gatgtttctgctcctaagatgtttcaatatggcagcaaagataagtattcaggaaagcct
ataagtgagctggatctttccaactgtgaacaatgcacccctagttatcgccttctaccc
aaaaattacctaataccgccagccagccagagaacagaacttggtgcagaggtgttgaat
gattactgggtttctgttacttcgggtagtgaggactattcctttaaacatatgcgcaaa
aatcagtatgaggagagtttgtttagatgtgaagatgacaggtttgaacttgacatgttg
ttagagtctgtaaatgtggcaactaagcgtgttgaagaactcttagaaaagattaatgct
aatataattaaaggagacagtccaattcgtattgaggagcacttgacagctctaaatctt
agatgcatagaaagactatatggtgatcacgggcttgatgtaatggatgtgctaaagaag
aatgcatctttagctttgccagtcatattaacccgcttgaagcagaaacaggatgagtgg
gcaaggtgtcgtgctgattttaataaagtttgggctgaaatatatgcaaagaactaccac
aaatcacttgatcatcgtagtttttactttaagcagcaggatactaagagcttgagcgct
aaagtcttactggctgaaatcaaagaaattagtgagaagaaaagaaaagaagatgatgtt
cttcttgcaattgctgctggaaacagacagccaattattcctcacttggaatttgtgtat
cctgatccagagatccatgaagatctgtatcaactcataaaatattcttgtggagaaatg
tgtacaactgaacagttggataaagctatgaagatttggacaacatttttagaacctgtg
tttggagtcccgtctcgatctcaaggtccagaggatgttgtcaaggataggaacaattct
gccaaaagtggcactgaagttgttgctggtgatggtagtcctgtaatcaatcctaagaat
ttaaacataaatagaaatggggatgaaaactttccatttgagcaatctcattcctgcaaa
caatggcaaccaagtggacatgctaaggttaaaaaggataatcatcttgattcggacagc
tttgcacaaaagactggagccttagggagtaatacgcagcagggtaaaatgaatatagat
gcatctattcctgatgaagtatcaagagccaataagcaagatcattccactgaacggttg
gtgaatgctgatgtctcactatcctcggctgtggagcaaaataatagaagtacaaatgtg
gataaggcaacaggacttgctgctactccattaagacctgctaatatatcttcagtagga
ggagttggtttagcttcattagagggtgctgattctgcacgaccagttacatcaacaaat
ggggccatcattgaggactctaaagttcacagacatcgggaagaatcagtgggacacttc
agatgtgaaagagaagagggtgagttatcacctaatggagactttgaagaggataacttt
gcagtttatggacataccagttcggatgcagttcataaaggaaaggatagtaacatttcc
cgaccataccaaaacagacatggggaagtagttcgtggtgaagcaggaggagaaaatgat
gctgatgatgaaggagaagaaagtccccatagatcattggaggatagtgaaaatgcttca
gaaaatggagatatttctggcacagagtctgctgatggtgaggagtgttctcgagaacgt
gaggaggatgggggtcatgatcatgatgacaaggctgagagtgaaggtgaggcggaagga
atggctgatgccaatgatgttgaaggggattgtgcctcattgccatattcagaacgcttt
cttgtcaatgtaaagcctctggcaaaatatgttcctccgacattgcatgagaaagaaagg
attggtcgagtcttttatggaaatgattccttttatgtgctatttagacttcatcagaca
ttgtatgagaggatacgctctgcaaaggttaactcatcgtcttctgaaaggaagtggagg
gcttcaaatgatacagactctactgatcaatatggcaggtttttaaacgccctttacaat
ttactggatggttcttctgatagtacaaaatttgaggatgactgtcgagctattattgga
actcaatcatatgtcttattcacattggataagttgatatataaacttgttaaacagctt
caagctgttgccgctgatgagatggatagcaagctgcttcaactatatgcatacgaaaaa
tcaagaaaacctgggagatttgttgatttagtttgtcatgaaaatgctcgtgttcttctt
catgatgagaacatatatcgtattgaatgttcaccttcacctacccaattgtctattcaa
ctgatggactatggatttgataaacccgaagtgactactgtgtcaatggaccctaatttt
tcggcctatctgcacaatgacttcctatctgttgtcccagacaaaaaggagaagtctgga
atttacttgaagaggaataagcgcaagaatggcagtggtgatgaattttcaagccagacc
atggatggactacaaattgtcaatggactggagtgtaagatagcttgcaattcgtctaag
gtttcatacgttttagacactgaagaccttttatatcaaacaagaagaaaaaaaaggagg
tccttgcatcagagcagttcatgccttgaacaatcaaactcctcaaaaatttcttcaagc
agagaacaacgagtctgcaaattattttcaaattga
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