Vigna unguiculata (cowpea): 114177789
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Entry
114177789 CDS
T06017
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vun03009
]
114177789
Ribosome biogenesis [BR:
vun03009
]
Eukaryotic type
90S particles
Other 90S particles
114177789
Pre-60S particles
Other pre-60S particles
114177789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
114177789
NCBI-ProteinID:
XP_027919122
LinkDB
All DBs
Position
3:complement(60701608..60714271)
Genome browser
AA seq
1273 aa
AA seq
DB search
MEGIEMEVPAFGTDEGNDDLCNSIISRFGNSTEENHQHLCAVIGAMSQELKDNNKPSTPF
AYFCAARLSLDKFTSESNPSRHIIDALLTVLSLAIPRVPRVLLKKESLQGQPLSESLLRV
LRSSSASESAIVSGLKCLSHLLIVKESVDWSDVSPLFNVLLGFLTDARPKVRKQSHLCHC
DVLLNFQNSSLLASASEGVTNLLERFILLVGGANANTGEGTKEAQQILYILDALKECLPF
LSRKSKTSILNYFKYLLDLHQPLVTRRITDGLSFLCHYPLSEVSPEALLELLNTLARSIE
SNKMSGDRLTFTARLLDAGMNKVYSLNRQICVVKLPIVFNTLKDILASEHEEAIHAATDA
LKSMISSCIDESLIKQGVEQISLSENKESRRSAPTIIEKICATVESLLDYHYTAVWDRVF
QVVSAMFQKLGNHSPYFMRGILKNMEEVQKLPDEDFPFRKQLHECFGAALVAMGPATLLS
LVPLNLEAEDLSDANVWLFPILKHYIVGAPLNYFSEEILVMIKRMREKAQKLEKQGLMVS
SRNADAIAYSLWSLLPSFCNYPSDTATSFMNLEKHLRSKLKEEPDIRGIICTSLRLLIQQ
NNIVDLEHKGCIGEDMAKEQVHYSPQVARENLYVLKSSAKNWLKDLSDVFLKSTKDDGGC
LQCTIGDVASIADKADVRNLFKEKMVKLYKYTQKARKVGTSTSSNSMQIDDASNNLSLSI
LRAQLLDLAVSLLPGLDAEDIALLFEAIKPAFQDVEGVMQKKAYKVLSIILKSSDSFVSL
KFEELLGTMVDILPCHFSAKRHRLDCLYFLVVHVSKSKDNLEHWRDIFLTEIILALKEAN
KKTRNRAYEILVEIAHAFGDEERGGNRENLNNFFQMVAGHFAGETPHMISAAAKGLARLA
YEFSDLVLTALKLLPGTLALLRSNNREIIKANLGFLKVLVAKSQAEGLQTHLKSMVEGLL
KWQDNSKNHFKAKVKLLLGMLVSKCGLEAVKAVMPEEHIKLLSNICKIKERKERNRSVKS
EETKSHFSKATTSRQSMWNHTKIFSDFDGDSGNSEAEHLNSRGGKASLHPKSSASSFRSN
MRLRKNLPEHLSDESDDEPLDLLDRQKTRSALKTSEHLKRKSRIDDEMEIDSEGRLIIRE
EGEGRKKKREDDDFDSRSEPDSHISAKSGTKGQKRRKTLDSGWAYTGKEYGSKKAGGDVK
KKDKLEPYAYWPLDRKMMSRRPQQRAAARKGMASVVKMTKKLEGKSASGALSLHNLKRKR
TPNKGTKGNKKAA
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcattgaaatggaggtacctgcatttggcacagatgaaggcaacgatgatctg
tgcaattcaatcatctctcgttttggaaactccaccgaggaaaaccaccagcacctctgt
gctgtcatcggcgccatgtcgcaggagctcaaagacaacaacaaaccctccactccgttt
gcctacttctgtgctgcacgactttcccttgacaaattcacgtctgaatccaatccctcc
cgccacatcatcgacgcccttctcaccgttctctcacttgccatccccagagtcccccgc
gtcctgttgaagaaggagagtctacagggacagccattgtcggagagccttctgcgagtt
ctccgatcttcgtccgcatcggagagcgcaattgtttccggattgaagtgcctctcgcat
ttgttgatagttaaggaaagcgtggactggtctgacgtgtctcccttgttcaatgtcttg
ttagggttcctgacggatgcaagaccaaaggtcagaaagcaatcacatttgtgtcactgt
gacgtcttgttaaacttccaaaattcttcactattggcatctgcaagcgagggagtcaca
aacctacttgaaaggtttatattgcttgttggtggggcaaatgcaaatactggtgaagga
actaaggaagctcagcagattctgtatattcttgatgccttgaaagaatgtcttcctttt
ttgtcacggaaatctaagaccagcattcttaattacttcaaatatctcttggatctgcat
caaccccttgttacaaggcgcattacagatggtctgagttttctttgtcactatccattg
tcagaagtttcccctgaagcgctacttgagttgttaaacacattggcccgttctatcgaa
tcaaataaaatgtctggagacagattaacatttactgctcgcttgcttgatgctggaatg
aataaagtttattctcttaaccggcaaatatgtgttgttaagctccccattgtctttaat
acacttaaagatattttggcatctgaacatgaagaggctatacatgcagccaccgatgcg
ctcaagagcatgataagttcttgtattgatgaaagtttgattaaacagggagtggaacag
atcagtttgagtgaaaacaaagaatcaaggagatcagcaccaaccatcattgaaaaaatt
tgtgcaactgtcgagagcttgcttgattatcactacactgcagtctgggatagagtattc
caagttgtttcagctatgtttcagaaattaggaaaccattcgccttattttatgagaggg
atactaaagaacatggaagaagtgcagaagcttccagatgaagattttccatttaggaaa
cagctgcatgaatgctttggagcagctctagtggcaatgggacctgcaactctgttgtcc
cttgtacctctgaatttggaagctgaagatttatctgatgcaaatgtctggctttttcca
attctaaaacattatattgttggtgcacctttaaattatttttctgaagaaattctggtt
atgattaagcgtatgagggagaaggctcaaaagcttgagaagcaagggttgatggtatca
tcaaggaatgcagatgcaattgcatactcgttgtggtctttgctgccttcattttgcaat
tatccttcagacactgctacaagtttcatgaatcttgagaaacatttgcgtagtaagctg
aaagaagaacctgatattcggggaataatatgcactagtttgcgacttctgattcagcaa
aacaatattgtggacttagaacacaagggttgtattggtgaggatatggccaaggaacaa
gttcattattcaccacaggttgcaagagaaaatttatatgttctgaaatcatctgcaaag
aactggttgaaagatttatctgatgtattccttaaatctacgaaagacgatggtggttgt
ttgcagtgtacaattggtgatgtagcttctatagcagataaagcagacgtaaggaatttg
ttcaaggaaaaaatggtgaagctttataaatacactcaaaaagccagaaaagtaggaacc
tccacaagttctaattctatgcagattgatgatgcatcaaacaatttgtctctatcaatt
ttaagggcacagcttcttgatttggcagtttcactgttgcctggtttagatgctgaagat
attgctctattatttgaagcaataaagccagcatttcaggatgttgaaggtgtcatgcag
aagaaggcatacaaagtactttcaatcattcttaagagctcagatagttttgtttcatta
aagtttgaggagctgcttggaactatggttgatattcttccatgtcacttttctgccaaa
cgacatagacttgattgcctttatttcttggttgttcatgtctcaaagtcaaaggataac
ctggagcactggcgagatattttcctgacagaaattatacttgctcttaaagaggcaaac
aaaaaaaccaggaacagggcttatgagattcttgttgaaattgcccatgcctttggggat
gaggagagaggtggaaacagagaaaacttgaataatttttttcagatggttgctggacac
tttgctggtgaaactccgcatatgataagtgccgcagccaaaggtttagcccgtttggct
tatgagttctctgatcttgttttaactgctttgaaattgctccctggcacactcgctctg
ttgcggagtaataatagagagataatcaaggccaatcttggttttttaaaggtattagta
gccaaatcacaagctgaagggttgcaaactcacttgaaaagcatggtggaaggtttgttg
aagtggcaagacaactcaaaaaatcatttcaaggcaaaggttaaacttcttttgggaatg
cttgtctcgaagtgtgggctggaggctgttaaagctgtcatgcctgaagaacatattaaa
cttctttccaatatatgcaagatcaaggagcggaaagagagaaatcgaagtgttaaatct
gaagaaactaaatctcatttttcaaaagcaactacatccaggcaaagcatgtggaatcat
acaaagattttttcagattttgatggggatagtggcaatagcgaagcagagcacttgaat
tctagaggtggcaaagcttccttacatccgaaatcatcagcatcttcatttaggtccaat
atgaggctgaggaagaatttgccggagcacttgtctgacgaatctgatgacgagccactc
gatctgcttgatcggcagaaaacaaggtcagctcttaaaacatcagagcatctgaaaaga
aagtccaggatagatgatgagatggagatagattcagaaggacggctgattatccgtgag
gaaggggaagggaggaagaaaaagcgtgaggatgatgattttgattcaaggagtgaacca
gatagtcacatatctgcaaagtctggaactaaaggccagaaacggagaaaaacattagat
tctggttgggcctacacagggaaggaatatggtagtaaaaaggcaggtggagatgttaag
aagaaagacaaacttgagccgtatgcatattggccgcttgatcggaaaatgatgagtcgg
cggccgcagcagcgggccgccgcaagaaaaggtatggctagtgttgtaaagatgacaaag
aaacttgaaggaaaaagtgcctctggtgcactttccctacacaatttgaagcgaaaaagg
actccaaacaaaggcaccaaaggaaataaaaaggccgcatga
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