Vigna unguiculata (cowpea): 114178060
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Entry
114178060 CDS
T06017
Name
(RefSeq) RING finger protein B-like
KO
K20285
Rab9 effector protein with kelch motifs
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vun04131
]
114178060
Membrane trafficking [BR:
vun04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
114178060
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Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_4
Kelch_5
Kelch_1
Kelch_6
Kelch_2
NANM
Motif
Other DBs
NCBI-GeneID:
114178060
NCBI-ProteinID:
XP_027919550
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Position
1:38452846..38457054
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AA seq
583 aa
AA seq
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MSLGVAGGLHFCDVLTLDITKMVWSKLTTTGEKPGPRDSHSAVLVGHKMIVFGGSNGFKK
VNHIHILDLVTKEWFRPECKGTPPSPRESHTATLVGDEKIVIFGGSGEGHANYLNDLHIL
DLRTMTWASPELKGDFPVPRDSHSTLAIGNKLVVYGGDSGDQYHGNVHMLDMATMTWSRL
TIQGSPPGVRAGHAAVNIGTKVYIIGGVGDKRYYNDVWIFDICNFSWTQLDIHFQQPQGR
FSHTAVAAGMDIAIYGGCGEDERPLNELLVLQLAAEHPNGRYYVPMCKPIGTYWNHEKNI
IPAEADTNSETILVRNNVEAFGNGAYEISSEKSSPHHFDSGTSRQKRRRIAAAKVWDVES
EQEDSFLSLSLHSSPYKSDQEQTPSQEANTLFPSTSQHENDSNYKRTLMNVPLKTPQALH
FLQHQLKQEQCLHVNEDRKRAQRQAAEQKPMIRPIQHLIGGEVRERVEGPFDPVSISPTA
VNGRIFRGVIFAPGAGVVSKGASSVPSSQAFLGTLRASQEAPICLHAEPYHGSRSRQTPV
ALPFPIMGATPSVVSKEHKIRSDLQGLALTLGGPASGNPQVKY
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgggggttgctggggggctgcatttttgcgatgttctcactctggacatcacc
aaaatggtttggagcaagctcactactaccggtgagaagccagggccgagagatagccac
agtgctgttcttgtggggcataaaatgatagtgtttggtggctcgaatgggttcaagaag
gtgaatcacattcacatacttgatcttgttaccaaagagtggtttcgacccgaatgtaaa
gggactcctccttctccacgtgaaagccatactgccactctggtaggtgatgaaaagata
gtgatatttggtggtagtggagaaggccatgctaactatttaaacgatttgcacattctt
gatcttcgaaccatgacttgggcttcccctgagttgaaaggtgattttccggtccccaga
gacagtcatagtacccttgcaatcgggaacaaacttgttgtgtatggtggagattctggt
gatcagtatcatggcaatgttcatatgcttgatatggctacaatgacttggtctagattg
acgattcaaggttctccaccaggagtcagggcaggtcatgctgcagttaacattggaaca
aaggtatatatcattggaggagttggagataaacgttactataacgacgtttggatcttt
gatatctgcaatttttcgtggactcaacttgatatacattttcaacagccacaagggcga
ttttctcatacagctgttgctgcaggcatggatattgcaatatatggcggatgtggggaa
gatgaacgtcctctcaacgaattgttagtgttgcagcttgcagcagagcatccaaatgga
cgttattacgttcccatgtgcaaacctattggaacttattggaatcacgaaaagaatatt
atcccagcagaagcggatacaaactcggaaactatcctcgtgaggaataacgtggaagct
tttggaaatggagcttatgaaatttcatcagaaaaatcgtcacctcatcactttgattca
ggtacttcacgacagaagaggaggagaattgctgctgcaaaggtatgggatgttgaatca
gaacaagaagatagttttctttcattgtctcttcattcttctccatataaatccgatcaa
gaacagaccccaagtcaagaagcaaatacattatttccatccacttcccaacacgaaaat
gactcaaattataagagaacattgatgaatgtcccacttaagactccacaggctcttcat
ttcctacaacatcaactaaaacaggaacaatgtcttcatgttaacgaggatagaaaaaga
gctcaacgtcaggctgcagagcagaaaccaatgatccgacccattcaacacctgattggt
ggcgaagttcgggagagagttgaaggaccctttgacccagtttcgatatctcctacagct
gtaaatggaaggattttccggggagtaatatttgcacctggagcaggagttgtctcaaag
ggggcaagttcagttccttcctctcaagcctttttgggtactttaagggcttctcaggaa
gcgccaatttgtttgcatgcagagccataccacggttcacgatcaaggcaaaccccggtg
gctttaccgtttccaatcatgggagcgactcctagtgttgtttccaaggagcataaaatc
aggagtgatcttcaaggattggctctaacactcggaggaccagctagtggaaatcctcag
gtaaaatattga
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