Vigna unguiculata (cowpea): 114178292
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Entry
114178292 CDS
T06017
Name
(RefSeq) oligouridylate-binding protein 1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vun03019
]
114178292
03041 Spliceosome [BR:
vun03041
]
114178292
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
114178292
Spliceosome [BR:
vun03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
114178292
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_7
RRM_5
RRM_8
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
114178292
NCBI-ProteinID:
XP_027919914
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Position
3:60606349..60610916
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AA seq
411 aa
AA seq
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MQQQRLRQHAMMQPSLYHHPALLTPPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP
LLQELFSAAGALEGCKLIRKEKSSYGFVDYFDRSSAAFAIVTLNGRNIFGQPIKVNWAYA
SSQREDTSGHFNIFVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFR
NQQDAQSAINDLTGKWLGSRQIRCNWATKGASASDEKQSSDSKSVVELTNGTSEEGLEIT
TDDAPEKNPQYTTVYVGNLAPEVTSVDLHHHFHSLGAGTIEDVRVQRDKGFGFVRYSTHA
EAALAIQMGNARILFGKPIKCSWGSKPTPPGTASTPLPPPTSANVPGFSLASLAAYERQM
ALSKMGGAHALLHQQGQHALKQVAMGMGAPGAGYDARFQNVATTQHLMYYQ
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaacagaggttaaggcagcatgccatgatgcaaccctctctctaccatcacccc
gctctccttactcctcctcagatagagcctatcttgagtggaaatctgccacctggcttt
gattcgagtacatgccgcagtgtttatgtcggcaacattcatccccaggttacagaacca
cttcttcaagagcttttttcggctgcaggtgcccttgaaggatgcaagcttatcaggaaa
gagaagtcatcctatggttttgtggactacttcgatcggagttctgctgcatttgctatt
gtaactctcaatgggaggaatatttttgggcaacctattaaggttaactgggcttatgca
agcagccagagagaggatacctcaggtcactttaatatttttgttggtgaccttagtcct
gaggtcacagatgcgacgttgtatgcttgcttctctgtatatcctagttgttctgatgca
agggtaatgtgggatcagaaaacaggccgttccaggggatttggatttgtttcttttcgg
aatcagcaggatgctcaaagtgctataaatgatttgactggaaaatggcttggaagcaga
cagattcgttgtaattgggcaacaaaaggggccagtgcaagtgatgaaaaacagagttcg
gattccaaaagtgtcgtggagttgactaatggaacatcagaagaaggcctggaaataacc
actgatgatgcccccgagaagaatcctcaatataccacggtttatgttggcaatcttgct
cctgaggtcacttctgttgatctccatcaccattttcattcacttggtgccggaactatt
gaagatgttagggtgcaacgagacaaaggttttgggtttgtgagatacagtacccatgct
gaagcagctcttgcaatacagatgggtaatgctcgaattctctttggcaaacctataaag
tgttcatggggtagcaaacccactcctccaggaactgcctctactcctcttccccctcct
acttctgcaaatgtgcctggtttttctcttgctagtcttgcagcatatgaacgccaaatg
gctttgagtaaaatgggtggtgcacacgcccttctgcatcagcaaggacagcatgcccta
aaacaggtagccatgggaatgggtgctccaggggctggttatgatgcaaggtttcagaac
gttgctaccacccagcacctaatgtactatcagtaa
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