Vigna unguiculata (cowpea): 114178310
Help
Entry
114178310 CDS
T06017
Name
(RefSeq) transcription initiation factor IIE subunit alpha-like
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114178310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vun03021
]
114178310
Transcription machinery [BR:
vun03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
114178310
Prokaryotic type
Archaeal type
TFE
114178310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
wHTH-PRTase_assc
Zn_ribbon_8
zf-C2H2_6
Zn_Ribbon_TF
Cas12f1-like_TNB
HTH_Crp_2
A24_N_bact
HVO_2753_ZBP
Motif
Other DBs
NCBI-GeneID:
114178310
NCBI-ProteinID:
XP_027919942
LinkDB
All DBs
Position
3:complement(54853818..54866597)
Genome browser
AA seq
474 aa
AA seq
DB search
MIEPYNKLVKLAARAFYDDLTSKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKD
LKLHTKQLRRTLRYFEEEKIITRNHRRETAKGAKIYSAAVAATADGHQAAKEGEEKVKLH
THSYCCLDYAQIYDVIRYRLHRMKHKLKDELENKNTLQEYICPNCGKRYNALDALRLVSF
EDEDFHCESCDGQLEVEIDKIAAQDGGDGDDNARRRRREKLKDMLQKMEAQLKPLMDQLS
RVKDLPVPEFGSLQAWEARASAAVRAASGDINVGDSKMSQLGYNGVPMPYSGDTKVVVDF
NNTEGKGEGFKSETDSTTLKVLPPWMITSGMNLTKEQRGEVKEETKLDGTSTSIVAQDID
DKKSTIAHDHNKNIQDEYIKAYYAALLKQQHDMEEAAKKQLSNTLAADNPSSSTSNRQVG
KKSKREEDDDGTEWEETPIAGNGNGGYKVRDLNVEAEKVPADDDDDDDVDWEEG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaccctataacaagttggttaaactagctgctagggctttctacgatgatctt
accagcaaaggagataatcagcctaaaacaggaaggagtgataacaggggaattgctgta
gtggtacttgacgcgctcacgagacggcaatgggttagagaagaagacttggcaaaggac
cttaaactgcatacgaaacaacttcgtcgaactttgcggtactttgaagaagaaaagatc
attactcgcaatcataggagagagacagcaaaaggtgcaaaaatttatagtgctgctgta
gctgctacggctgatggtcatcaggcagcaaaagagggagaagaaaaggtcaagctgcac
acacactcttactgttgtctagattatgctcagatttatgatgtgattaggtacagacta
catcgcatgaaacataagctgaaagatgagttagagaacaaaaatacacttcaggaatat
atatgtccaaactgtggaaaaagatacaatgctttggatgctctacggttagtatcgttt
gaagatgaagacttccactgtgaaagttgtgatggacaactagaggttgaaattgataag
atagctgctcaagacgggggagatggagatgacaatgcaagaagacgcaggcgtgaaaag
ttaaaggacatgcttcaaaagatggaggcacagctcaaacctttaatggatcaactcagt
cgggtaaaagacttgcctgttccagaatttggcagtcttcaagcatgggaagctcgagct
agtgctgctgtccgtgcagctagtggagatatcaatgttggagattctaaaatgtcgcaa
ctaggatataatggagtgccaatgccatacagtggagacactaaggttgtagttgacttc
aacaatactgaaggaaaaggagagggctttaagtctgaaactgacagtacaactttaaag
gttttgcctccctggatgattacatcaggtatgaatcttacaaaggaacaacgtggggag
gtgaaggaggaaacaaagttggatgggacttcaacttccattgtagcacaggacatagat
gacaagaagtcaacaattgcccatgaccataataaaaatatacaggatgagtatattaag
gcttactatgctgctttacttaaacaacaacatgatatggaagaagctgcaaaaaaacaa
ttgtcaaatacacttgctgcagacaatccttctagcagtacttccaatcgtcaggttggc
aagaaatccaaacgtgaggaagatgatgatggtactgagtgggaggagactcctattgca
ggcaatggaaatggaggttacaaggtcagggatttgaatgttgaagctgagaaagttcca
gcagatgatgacgacgacgatgatgtagactgggaggaaggttga
DBGET
integrated database retrieval system
