Vigna unguiculata (cowpea): 114178950
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Entry
114178950 CDS
T06017
Name
(RefSeq) WD-40 repeat-containing protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03082
ATP-dependent chromatin remodeling
vun03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114178950
03083 Polycomb repressive complex
114178950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vun03036
]
114178950
Chromosome and associated proteins [BR:
vun03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
114178950
Histone modification proteins
HAT complexes
HATB complex
114178950
HDAC complexes
Sin3A-HDAC complex
114178950
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
114178950
PRC2.2
114178950
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
114178950
Heterochromatin formation proteins
Other heterochromatin formation proteins
114178950
Chromatin remodeling factors
NuRD complex
114178950
NuRF complex
114178950
NuRF complex (fruit fly)
114178950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD_LRWD1
eIF2A
MIOS_WD40
Beta-prop_RIG_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_1st
Phage_CRI
Motif
Other DBs
NCBI-GeneID:
114178950
NCBI-ProteinID:
XP_027920908
LinkDB
All DBs
Position
3:complement(15568336..15571633)
Genome browser
AA seq
425 aa
AA seq
DB search
MGKEEEEMRGEIEERLINEEYKIWKKNSPFLYDLVITHALEWPSLTVEWLPDRHEPPGKD
YSLQKVILGTHTSENEPNYLMLAQVQLPLDDAENDARHYDDDRPDIGGFGCANGKVQIIQ
QINHEGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLRGHNTE
GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKTLEAMQIFKVHEGVVEDVAWHLRHE
YLFGSVGDDQYLLIWDLRTPAVSKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKISAPLHIFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQSPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDEDDLPEEST
KAAAS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagaggaggaagagatgaggggtgagattgaggagcggctgataaacgaggag
tacaagatatggaagaagaatagtccttttctgtatgatctggtgattacgcatgccctt
gagtggccttccctcaccgtggagtggcttcccgaccgccatgaaccacccggcaaagac
tattcgctgcagaaggttatattgggcacccacacctctgagaatgagcccaattaccta
atgttggcccaggtccaacttccccttgacgatgctgagaacgatgcccgccactacgac
gacgaccgccctgacatcggtggctttggctgtgccaatggcaaggttcagatcatccag
cagatcaaccatgagggtgaggttaacagggctcgctacatgccccagaaccccttcatc
attgccaccaagactgttagtgctgaagtttatgtctttgactacagcaagcacccctcc
aagccccctcttgatggggcatgcaaccctgatttgaggctcaggggtcacaacactgag
ggttatggcttgtcctggagtaagttcaagcaggggcacttgcttagtggttctgatgat
gctcagatttgtttgtgggatattaatgccactcccaagaataagaccctcgaggcaatg
cagatatttaaggtacatgaaggtgttgtggaagatgtggcttggcatttgaggcatgag
tacttattcggttctgtgggtgatgatcaatacttgcttatatgggaccttcgaacgccg
gctgtcagcaagcctgtccaatctgtggttgcccatcaaagtgaggttaactgcttggcc
ttcaatccctttaacgaatgggttgttgctactggttctacggataaaactgtgaagttg
tttgatctgcggaagatcagcgctcctctgcacatcttcgattctcacaaggaggaggtt
ttccaggttggatggaatccaaagaatgaaactatcttggcttcttgttgtctgggtagg
aggctcatggtgtgggatcttagcaggattgacgaagagcagtcaccagaagacgcggaa
gatggtccaccagaattgctctttattcatggtggtcatacaagtaaaatatctgatttt
tcctggaatccatgtgaagattgggttgttgctagtgtcgctgaagacaacatacttcaa
atatggcagatggcagagaacatataccacgacgaagatgatctgccagaagagtcaacg
aaagctgcagcttcgtaa
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