Vigna unguiculata (cowpea): 114179231
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Entry
114179231 CDS
T06017
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03020
RNA polymerase
vun03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114179231
09124 Replication and repair
03420 Nucleotide excision repair
114179231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vun03021
]
114179231
03400 DNA repair and recombination proteins [BR:
vun03400
]
114179231
Transcription machinery [BR:
vun03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
114179231
DNA repair and recombination proteins [BR:
vun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
114179231
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
114179231
NCBI-ProteinID:
XP_027921295
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All DBs
Position
3:27641932..27645773
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AA seq
318 aa
AA seq
DB search
MEGASYARMPRVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS
VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRVKCMTDQTLDV
SSKDLYSSDPSVVPVDFSDPASSDSSESRGVIIVKLRRGQELRLRAIARKGIGKDHAKWS
PAATVTFMYEPEIHINEDLMETLTLEEKREWVDSSPTRVFEIDPVTQQVMVVDAEAYSYD
DEVLKKAEAMGKPGLVEIIARQDSFIFTVESTGAIKTSQLVLNAIEILKQKLDAVRLSED
TVEADDQFGELGAHMRGG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgcatcgtatgcgcgcatgccgagggtgaaaatccgcgagctgaaggatgat
tatgccaagttcgagctccgggatacggatgcgagtatcgcgaacgcgctgcggcgcgtg
atgatcgcggaggtgccgacgatcgcgattgatctggtggagatagaggtgaattcgtcg
gtactgaacgacgagttcatagcgcacagactcggactcattccgctcacgagtgagcga
gccatgtccatgcgcttctcacgtgactgcgacgcgtgtgacggcgacggccagtgtgaa
ttctgctccgtggagtttcaccttagggttaagtgtatgactgaccaaaccctcgatgtc
tccagcaaagacctttacagttccgacccctccgtcgttcccgtcgatttctctgaccct
gcttcctccgattcttccgagagcaggggggttatcattgtgaagctgaggcgaggacaa
gagctgaggctgagagcgatagctaggaaggggattggcaaagatcatgccaagtggtca
cctgctgcaactgtcactttcatgtatgaaccagagattcatataaatgaggacttgatg
gagacactgactcttgaggagaaaagagaatgggttgatagcagccctacacgtgtgttt
gaaattgatccagtaacacaacaggtaatggtggttgacgctgaggcatactcatatgat
gatgaggtgctcaagaaagcagaagccatggggaagcctgggcttgtggaaatcattgca
agacaagatagcttcatattcacagttgaatctactggagcaattaaaacttctcaatta
gtactaaatgccatagaaattctcaagcagaagctggatgctgtgcggctatctgaagat
acagtggaggctgatgatcagtttggtgagctaggtgcacatatgcgaggaggataa
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