Vigna unguiculata (cowpea): 114180247
Help
Entry
114180247 CDS
T06017
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vun03036
]
114180247
Chromosome and associated proteins [BR:
vun03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
114180247
REST complex
114180247
Heterochromatin formation proteins
Other heterochromatin formation proteins
114180247
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
114180247
NCBI-ProteinID:
XP_027922334
LinkDB
All DBs
Position
4:40174609..40184395
Genome browser
AA seq
1397 aa
AA seq
DB search
MKRARDDMYSASASQFKRPPFTTSSRADSYGQNQVPGSGGGGGGGGGGSNGGGVGGGATT
SQKLTTNDALSYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIARVKELFKGHNN
LIFGFNTFLPKGYEITLDEDEAPPKKTVEFEEAISFVNKIKKRFQSDEHVYKSFLDILNM
YRKEHKDIGEVYSEVATLFKDHRDLLEEFTRFLPDTSAAPSTQHAPYSRNSLQRFNERSS
TAPMMRQMPPDKAQRYRRDRLPSHDHDMSAERPEMDDDKTMLNIHKERKRDSRDRRMRDQ
DEREQDLDNSRDLNLQRFPDKKKSVKKAEGFGMAADFPSYEDKDTLKSMYSQAFSFCEKV
KEKLSSSDDYQTFLKCLHIFSNGIIKRNDLQNLVTDLLGKHSDLMDEFNDFLERCENIDG
FLAGVMSKKSLSTDAHLARPSKLEDKDREHKRDMDGAKEKERYKEKYMGKSIQELDLSDC
KRCTPSYRLLPADYPIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFR
CEDDRYELDMLLESVSSAAKRAEELYNNINENKISVETLNRIEEHFTVLNLRCIERLYGD
HGLDVIDILRKNPTHALPVILTRLKQKQEEWSRCRSDFNKVWAEIYAKNHYKSLDHRSFY
FKQQDSKNLSTKSLVAEIKEIKEKQQKEDDIIQSIAAGNKQPLIPHLEFEYPDAAGIHED
LYKLVRYSCDELFSSKELLNKIMRLWSTFLEPMLGVPTQSHATERAEDRKTGHNVRNFGV
PSIGGDRSPHADSLSMNSRLPKSDKNEADGRITEAKNVHRASIATNDKENGSVGGEHGCR
DDPLMDKGLKNVECNDKASGFSKPFTSDDQGAKNSVSIAIRGENSLNRTNLDASPARALT
PSRPTDVDDSVAKSQVANVPLVEGCDMATPVPVANGVLSESSKVKNHDESAGPCKIEKEE
GELSPNGDSEEDNFVAYGDSNVQSMAKAKHNTERRKYQSRNGEDECCPEAGGDNDADADD
EDSENVSEAGEDVSGSESAGDECFREDHEEEEDIEQDDVDGKAESEGEAEGICDAQAGGD
GTSLPLLERFLSSVKPLTKHVSAVSFVEEMKDSRVFYGNDDFYVLFRLHQTLYERILSAK
THSMNAELKWKAKDASLPDPYSRFMNALYNLLDGSAENAKFEDECRAIIGNQSYVLFTLD
KLIYKLVRQLQTVATDDVDSKLLQLYEYERSRKPGKLNDSVYHANAHVILHEDNIYRIQC
SSSPSRLSIQFMDNMNEKPELFAVSIDPNFSFYLHNDFLSVFPGKKEPHGIILHRNKRKY
GNLDELSAICSAMEGVKVINGLECKISCNSSKISYVLDTQDFFFRPRKKRRMPPAGTTTS
QFRRDREERFRKLLACS
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgaagagggcaagggatgatatgtactctgcctctgcctcccaattcaagcgcccccct
tttactacttcgtcgcgtgctgattcctatggacaaaaccaagtccctggaagtggaggg
ggagggggtggaggtggaggaggtagcaacggaggtggtgttggtgggggagcaactact
tcccagaaactgactaccaatgatgccttatcctatttgaaggaagtcaaagacatgttt
caggaccaaagagagaagtatgacatgttccttgaggtcatgaaagatttcaaggctcaa
aggactgacacagctggtgtcatagcaagggtgaaggaattgttcaaagggcacaacaat
ttgatttttggatttaacacattcctgccaaaaggttatgagataacacttgatgaggat
gaggctcctccaaagaaaacggttgaatttgaagaagcaatcagttttgtgaacaagata
aagaagcggttccaaagtgatgagcatgtttacaaatcattcttggacattttaaacatg
tatcgcaaagagcacaaggacattggtgaggtttatagtgaggttgctaccctcttcaag
gaccatcgagatttgcttgaggagttcactagattcttaccagatacttctgctgcacct
tccacacagcatgctccatatagtcgaaattcgttgcagcgctttaatgagcggagttct
acggccccaatgatgcgccaaatgccaccagacaaggcacaacgttatcgaagagacagg
cttccttctcatgatcatgatatgagtgctgaacgccctgagatggatgatgacaaaaca
atgttgaacatacacaaggagaggaagcgagacagtagggataggagaatgcgtgatcag
gatgagagagaacaagatcttgataacagcagggatttgaacttgcaacgctttcctgac
aaaaagaaatccgtcaagaaggctgaaggttttggaatggctgctgactttccttcttat
gaagacaaagataccttaaagagcatgtatagtcaagcattcagtttctgtgagaaagtt
aaggagaagttgagcagttctgatgattaccaaacattcttgaaatgccttcacattttc
agcaatggaataattaaaaggaatgatttgcaaaatttggtaactgatttacttggaaag
cattcagatcttatggacgaatttaacgatttcctggagcgttgtgaaaatattgatgga
ttccttgctggtgtcatgagtaaaaagtcactatctactgatgctcatttggcaagaccg
tcaaagttggaggacaaagacagagagcacaagcgtgatatggatggagccaaagagaag
gaaagatacaaggagaaatacatgggaaaatccattcaagaacttgaccttagtgactgc
aaacgttgtactcccagctaccggcttttgcctgcggattatccaattcctacagctagt
cagagatctgagcttggtgctcaagtattgaatgaccactgggtatctgtgacttctgga
agtgaggattactctttcaaacatatgcgaagaaatcagtatgaagaaagcttgttcaga
tgtgaagatgacagatatgagctggacatgttactggagtctgtgagttcagctgctaaa
cgagcagaggaattgtataataacattaatgaaaataaaataagtgtggagaccctgaac
cgtattgaagagcacttcactgttctaaatttaaggtgcattgaacgactctatggtgat
catggtcttgacgtaatagacatattgcggaaaaacccaacccatgccctgcctgtaata
ttgactcgactgaagcagaagcaagaggagtggagtaggtgtcgttcagatttcaataaa
gtatgggctgaaatttatgctaaaaaccactacaaatcactggatcatcgtagcttctat
ttcaaacaacaagattctaagaatttgagcacaaaatctttggttgccgagattaaagaa
attaaagaaaaacagcagaaagaagatgatattattcagtcgatcgcggctggaaataaa
cagcctctaattcctcatctggaatttgaatatcctgatgctgctggaattcatgaagac
ctgtataaacttgttcgatattcatgtgatgagttattctcaagtaaagagttgttaaat
aaaattatgaggctgtggagtaccttcttggagccaatgcttggtgttcctacccagtct
catgcaacagaaagggcggaggatagaaaaactgggcataatgttcgcaattttggtgta
ccaagcatagggggtgacagaagccctcatgcagactctctttcaatgaattcaaggtta
ccaaaatcggataagaatgaagctgatggtagaataactgaagcaaagaatgttcaccgg
gctagtatagctaccaatgataaagaaaatggatctgttggtggtgaacatggttgtagg
gatgatccattgatggataaaggactgaaaaatgtagaatgcaatgacaaagcctccgga
tttagcaaaccgtttacctccgatgatcaaggagctaaaaacagtgtatcaattgcaatt
agaggagaaaacagcctgaacagaacgaacttagatgcatcaccagcgcgtgcccttact
ccatcacgaccaactgatgttgatgattctgtagccaagtctcaggttgctaatgtacca
ttggtggagggatgtgacatggcaactccagtacctgtggccaatggtgttttaagtgaa
agcagtaaagttaaaaatcatgatgaatctgctgggccttgcaaaattgaaaaggaagag
ggagaattatcaccaaatggtgactcggaggaggataactttgttgcctatggagattca
aatgtgcagtcaatggctaaggcaaaacacaacactgaaagaagaaaatatcagtctaga
aacggagaggatgaatgttgtcctgaggctggaggtgacaatgatgcagatgctgatgat
gaggacagtgaaaatgtttctgaagctggtgaagatgtctcaggcagtgaatcggctggt
gatgaatgctttcgagaagatcatgaagaggaggaagatatcgaacaagatgatgttgat
ggtaaggctgagagtgaaggtgaagctgaggggatctgtgatgcacaagctggaggagat
ggcacatctttgccattgttagaaaggttcctttcatctgtgaaacctctcacaaagcat
gtatcagcggtttcatttgttgaagaaatgaaggactcaagggtgttctatggaaatgat
gacttctatgtgctttttagacttcatcaaactctttacgagagaatcttatcagcaaaa
acacattcaatgaacgcagaattaaaatggaaagcaaaagatgctagcttaccagatcct
tattcaagatttatgaatgcgttgtacaacttgcttgatggatctgctgaaaatgcaaag
tttgaagatgaatgccgagcaattatagggaaccagtcatacgtgttattcaccttggac
aagttaatatacaaattggttagacagcttcaaactgttgcaaccgatgatgtggacagt
aagcttctccaattatatgaatatgaaaggtctcggaagcctgggaagttaaatgattct
gtatatcatgcaaatgctcatgtcatccttcacgaggataatatatatcggatacaatgt
tcctctagcccctcacgactatccatccagtttatggacaatatgaatgaaaagcctgaa
ttgtttgccgtttctattgatccaaatttctccttttatctgcacaatgattttctgtca
gtctttccaggcaaaaaggaaccccacggcatcattctgcatagaaacaaacgcaaatat
ggaaacttagatgagctttctgcaatatgctctgccatggaaggtgttaaagtaattaat
ggattggaatgcaagatatcttgcaactcatccaagatttcttatgttcttgacacacaa
gatttcttcttccggccgagaaagaagagacgaatgccgccggcagggacaacaacctcc
cagtttcgtagggacagagaggaaagattccgcaaattgttggcatgctcgtaa
DBGET
integrated database retrieval system
