Vigna unguiculata (cowpea): 114180416
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Entry
114180416 CDS
T06017
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114180416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vun03019
]
114180416
03016 Transfer RNA biogenesis [BR:
vun03016
]
114180416
Enzymes [BR:
vun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
114180416
Messenger RNA biogenesis [BR:
vun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
114180416
Transfer RNA biogenesis [BR:
vun03016
]
Prokaryotic type
tRNA degradation factors
114180416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
Urease_gamma
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
114180416
NCBI-ProteinID:
XP_027922536
LinkDB
All DBs
Position
4:42010417..42018538
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AA seq
973 aa
AA seq
DB search
MRRANPLLRKLPPHFLTRRGFRFRTICSGRLGSAGATTTTKHLDIFTEQFEIGSRVITLE
TGKFARFANGAVVLTMENTNVLSTVASAKGDAVRDFLPLTVDYHEKQFAQGVIPTSFARR
EGPPKERELLCGRIIDRPIRPLFPPGFYHEVQVTASVLSSDGKHDPDVLAANATSAALML
SDIPWGGPIGVVRIGRICGKFIVNPTMDELKLSDLNLVYACTMDKTLMIDVQASEISEKD
LEAGLRMAHPEAVKYIEPQIRLAAKAGKSKKEYKLSMLSDKTMDKVTNIAEEPIKAVFTD
PTYGKFERGEALDNITQDVKRVLEEEGDEESLKVLSKAVDTVRKKVVRKRIIAEGHRVDG
RQLDEVRPLYCEAGCISMLHGSALFSRGETQVFCTVTLGAPTDAQRLESVVGPPTKRFML
HYSFPPFCINEVGKHGGVNRREVGHGTLAEKSFLAVLPPKEDFPYTIRVNSEVMASDGST
SMATVCGGSMALMEAGIPVREHVAGVSVGLVSKLDPSTGKIEDYRILTDILGLEDHLGDI
DFKIAGTRKGVTACQLDIKPAGIPLDIVCECLEPARKARLLILERMEQEISIPRNKNDNT
SPRLATLKYNNDAIRRLIGPMGALKRKMEEETGARMSVGDGELTIVAKNQSVMDKILEKI
DFVVGREIEVGGIYTGIVSNIKEYGAFVEFNGGQQGLLHISELSYEPVSRVSEVVSVGQK
LSLMCIGQDVHGNIKLSLKATLSRPGRLKSNDVIEGSVTSAKETDGNASSVQEQNSASEL
SLGEAKSSTSQVPVILIRSAAECDEEEKSSTSNPSSKAPCVDNGVQLNRKSKSRPSQNAN
DSTPKSKSRKSQDVIDSSTSHSGPLPYTNAKKTKLSMQKESKSELQKQEEGEQEYKDKVS
VTAKDVEVGTKVTAKIYQIRAHGLVLDLGGGVRGVYRFEENKSMDFKIGDEIPVVCSSFS
SKGIPVLSLVDDK
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgaggagagcgaacccactcctccgcaaactaccaccgcacttcctcacacggcgcggc
ttccgttttcgcaccatttgctccggccgcctaggctccgccggcgccaccaccaccaca
aaacacctcgacatcttcacggagcaatttgaaatcggctcgcgcgtgatcacgctcgag
acaggaaagttcgcccgcttcgcaaacggcgccgtcgttttgaccatggaaaacactaac
gttctctcgaccgtcgcctccgcgaaaggtgacgctgttcgcgatttcttacctctcacg
gtggattatcatgagaagcagttcgcgcaaggcgtgattccgacgtcgttcgcgcggaga
gaaggtcctcccaaagagcgcgagctcttgtgtgggcgaatcattgaccggccaattcga
cctctgtttcctcctggattttaccacgaggttcaggtaacggcaagtgttctttcttct
gatggaaaacatgatccagatgtattggcagctaatgcaacatcggctgctttaatgtta
tcagatattccttggggcggtcccattggagtggttcgaattggtaggatatgtgggaag
tttatagtaaatcccaccatggatgagcttaaattgagtgatcttaacttggtatatgct
tgtacaatggacaaaactttgatgattgatgtgcaagcttctgagatatcagagaaagac
ttagaagctgggctaaggatggctcatccagaggcagtcaagtatattgaacctcaaatc
agacttgctgctaaagctggtaaatctaagaaggaatacaaattatctatgctgtctgac
aaaacaatggataaagttactaatatagcagaggaacctatcaaagctgtttttactgat
cctacctatgggaagtttgaacgtggggaagcattggacaatattacacaagatgtaaag
agagtgcttgaagaagaaggtgatgaagaaagcttaaaagtattatcaaaggctgtagat
accgtaaggaagaaggtggttcgtaaaagaattattgcagaaggacacagggttgatgga
agacagctagatgaagtaagacctttgtattgtgaagctggatgtatatccatgttgcat
ggatctgcattattctcccgtggagaaacacaggttttttgtacagtaacacttggagca
ccgactgatgctcaacgcttggagtctgttgtcggtcctccgacaaagagatttatgctt
cattatagttttccaccattctgtataaatgaagttggtaaacatggtggtgtaaacagg
cgtgaagttggtcatggaactcttgctgagaaatcttttcttgctgttttgccccctaaa
gaagattttccgtataccattcgtgtcaactctgaagtgatggcttcagatggttcaaca
tcaatggcaactgtatgtggaggtagtatggctttgatggaggctggcattcctgtacgt
gaacatgttgccggggtttctgtgggtcttgttagtaagcttgatccatctactggcaaa
atagaagactatcgcatattgactgatattctgggtttggaagaccatttgggtgatata
gacttcaaaattgctggaactcggaaaggagttactgcttgtcagttggatataaaacca
gctggaattcctttggatatcgtttgtgaatgtttagaacctgcacgcaaagctcgtctt
ctcattcttgaacgcatggaacaagaaattagtatacctcgcaacaagaatgacaatact
tctccacgactagccaccttaaagtacaacaatgatgctattcgtcgcctaattgggcca
atgggcgctctaaagagaaaaatggaagaggaaacaggtgcacgaatgtctgtaggcgat
ggagaacttacaatagttgctaagaatcaatctgttatggacaaaatactagaaaagatt
gattttgttgtgggtcgtgaaattgaagttggaggtatctacacaggtattgtcagcaac
ataaaagaatacggcgcttttgtggagtttaacggtggccagcaaggcctactccacatt
tctgagttgtcatatgaacctgtttctcgagtttcagaggttgtctctgttggccagaag
ctttctttgatgtgcataggccaagatgttcatggtaacatcaaattatcccttaaagca
actttgtctcgtcctggaagattgaagagtaatgatgtaattgaaggatctgttacgtcc
gcaaaagaaacagatgggaatgcgtctagtgtacaagaacaaaattctgcttctgagttg
tctttgggtgaagcaaaatcctcaacctcccaagttccagtaattttaatacgtagtgct
gcagagtgtgatgaagaggagaaatcttctacctcaaatccttcttccaaagctccttgt
gtagataatggggtccaattgaatcgcaagtcaaaatcacgaccatctcaaaatgcaaat
gattctacaccgaaatcaaaatctcgtaaatctcaagatgttatcgattcttcaacttct
cattcaggtcccttgccatatactaatgctaagaagacaaaactttcaatgcaaaaagag
tcaaaatctgaacttcaaaagcaagaggagggtgaacaagaatataaagataaggtgtct
gtaactgcaaaagatgttgaagttggaaccaaagtaactgctaaaatatatcaaattcgt
gcacatgggttagtgttggatttgggtggaggagttcgaggagtgtaccggtttgaggaa
aataagagtatggattttaaaataggcgatgagatcccagttgtgtgctcaagcttttct
agcaagggaattcctgtattgtctttagttgatgataaataa
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