Vigna unguiculata (cowpea): 114180833
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Entry
114180833 CDS
T06017
Name
(RefSeq) branchpoint-bridging protein isoform X1
KO
K13095
splicing factor 1
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114180833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vun03041
]
114180833
Spliceosome [BR:
vun03041
]
Complex A
Other components
Complex A specific factors
114180833
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
SF1-HH
KH_1
Motif
Other DBs
NCBI-GeneID:
114180833
NCBI-ProteinID:
XP_027922925
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Position
1:41946953..41953635
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AA seq
787 aa
AA seq
DB search
MSAEIDSTSAPEPHKMSGTSSVTTTSGQKLSIFAAKSGFVIPKNKLSGSLVPIFRGAKKH
GVTGAINEESSKQTERKSKWGPDLTQDATVRRGKALALQIRVDQITKQLESEKLEVGDTQ
NLPLGAENTDKSKSGSQMNIKKSEMLELEKREAIGEILKLDPSYKPPRGFKPLLKEASIP
LPVQEYPGYNFVGLIYGPEGDNQKQLEKETAAKIKIHGTKADTGEKGEIKPGTDIHSSYK
EMCVNISADSFEKVDAAMSIIELLITSVTGNLAAGSTPSISVSRDSTDILGQSQEGQPSH
ADSVSLENQAVLQPVAVTQKHEDNFQYSTPWFSVVPSNTPIFASSGTVAPLNPLGLGRTP
HFPSQTSNTVPTFGSQPGFQPIIPNQHVSVQAPPPRQILHYPHLTQATPLGHVGPPRNAS
IISVQNLSTPTNASHSFPVTLSQSTPIGQLQTSVSSFPLPISGVSPLPIANQPITHLGVP
SGQNEPLVAVKTSIGPSNMGSMVPPGRPASLHQQPEVAFMPPQSNMSMTPRSASFPPHQV
GISPGPLSSLRPMSVPIPAPKHSSVNHLAGPVSFPSSGISPSFPLPQQAGIPNSASGIAP
FHTHLKPSVLVPSKSGNFTFRSHAPNADYSQAGATQEPPSGPRPPPFGFGVPDQPLQNFP
RTQFTAQVDQTISFGGRSNSIPTPRHTAFPYGGQPAPRSPVPQMGMNNFIPAPQRPNLTG
AVAQRGMPIRQSYAVQMTRPDIPMPLNHKFVNNTLMASGKLPYSADQIYDPFSPTSAPPQ
QKGNPGQ
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagagattgattcaacttctgctcctgaacctcataaaatgtctggaacttca
tcagtaacaaccactagtggccaaaagctgtctatatttgctgccaaatcagggtttgtc
atccctaaaaacaaattgtcggggtcactggtccctattttccgaggggctaaaaaacac
ggggtcactggagccatcaatgaagaaagttcaaaacaaactgagaggaaatcaaaatgg
ggacctgatcttacacaggatgcaactgtcaggaggggaaaagctctagcattgcagatt
cgagtggatcaaatcacaaagcagttggaatcagaaaaactggaagttggggacactcag
aacttgccattgggagctgagaacacggataaaagcaaatctggctctcaaatgaacatc
aagaagtcagaaatgctcgaacttgaaaagcgcgaagccataggcgaaatactaaaatta
gatcccagttacaaacctccacgtggttttaaaccattgttaaaagaagccagcattcct
ttgcctgttcaagaatatcctgggtacaattttgttggtctaatatatgggcctgaaggt
gataatcagaaacaactagaaaaggaaactgctgccaagataaaaattcatggaaccaaa
gcagacacaggagagaaaggtgaaattaagcctggaactgatatccattccagttacaag
gagatgtgtgttaacatatcagctgatagttttgaaaaagtggatgcagcaatgtcaata
attgaactgctgattacctctgtaactgggaatttagccgctggctctacaccctctata
tcagtttctagggacagcactgatattctgggtcaaagccaagaaggccagccttctcat
gcagattctgtttctctggaaaaccaggctgttctgcaaccagtagctgttacccaaaag
catgaagataacttccaatactctacaccatggttttcggtggttccttctaataccccc
atttttgcttcatctggcactgtagcccccctaaacccattaggccttggtagaactccc
cattttccatcacaaacttcaaatacggttcctacttttggttctcaacctggatttcaa
ccaattattccaaatcaacatgtttccgtgcaagcaccaccaccaagacagattttacac
tatccacatctgactcaagcgactcctttgggtcacgttggccccccaagaaatgcttct
ataatatctgtacagaatctgtcaactccaacaaatgcttcacattcatttcctgttact
ttaagccaatcaacgccaataggacaactgcagacatcagtgtcttcatttcctctaccc
atatctggtgtatcaccattgcccatagctaaccagcccatcacccatcttggggtccct
tctggccagaatgaaccccttgtcgctgttaaaacatccattggtcccagcaatatgggg
tcaatggttccacctggaagacctgcctctctacatcagcaaccggaagttgcatttatg
ccaccacagtcaaatatgtcaatgacaccacgatctgcttcctttcctccacatcaagta
ggaatatcccccgggccattatcttctttgagacctatgtctgtaccaatacctgcacct
aaacattcatctgtaaaccatttagcaggacctgtttcatttccttcgtcaggaatatcc
ccttcttttccattgcctcagcaagcaggaatacccaattctgcttctggaattgctcct
ttccacacccatttaaaaccatctgtcttggtgccatcaaaatctggaaattttactttt
cgatcacatgcccccaatgcagactacagtcaagcaggtgctacacaggagccaccttct
ggtccacggcctccgccatttgggtttggcgtgcctgatcagcctcttcaaaactttcct
aggacacaattcactgctcaagtggatcaaaccatttccttcgggggaagatcaaactca
attccaaccccaagacatactgcgtttccatatggtggtcaacctgcacctagatctcca
gtcccacaaatgggtatgaataacttcattcctgctccgcaaaggccaaacttgaccggt
gctgttgcccaaagaggcatgcctatccgacaaagctacgctgttcagatgacacggcca
gatatcccaatgcccctgaatcacaagtttgtcaacaataccctcatggcttctgggaag
ctaccatattctgcggaccaaatttatgaccccttttcacccacttctgcacctccacaa
caaaaaggtaatcctggacaatga
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