Vigna unguiculata (cowpea): 114181246
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Entry
114181246 CDS
T06017
Name
(RefSeq) sister chromatid cohesion protein SCC2 isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vun03036
]
114181246
Chromosome and associated proteins [BR:
vun03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
114181246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
PHD
PHD_2
Motif
Other DBs
NCBI-GeneID:
114181246
NCBI-ProteinID:
XP_027923449
LinkDB
All DBs
Position
4:complement(5809004..5827935)
Genome browser
AA seq
1805 aa
AA seq
DB search
MSFPDTSDAGAAAAFSGSRGIGLSNTVHSELAACLPLPSLPVFCGASDQDLRLVDSPARL
NRVDVLAQSGKIAELLRHTDVSYLNLRDEAKGVPYIYVEPLELHDEVLRCNPEAFEYSTA
GPVKEQISGSAVPEKRQSESSFSVPSQTQKDYNATHSRQLDNFSTNDISTLSSKKSKVKK
KGGDGISIAPDSAELQGAHIQKFCELLEDLCSKSELNSDDRDEAEWLSLPLSDLRLLVNE
ITSIREKKLLHLVPIEVLVRLLKVLDHQIHRAEGLSIEECDNSSDSELVSSVFIALESIH
AALAVMAHTDMPKQLYKEEIIERILEFSRRQIMDVMCACDPSYRALHRPGENTGFEVDDY
EENDVEFGSASKKRRTNKTLKLKKSASSRVSTAVNTILQKLCTVLGLLKDLLLIERLSDS
CILQLVKTSITTFLVDNIQLLQLKAISLLSAIFYLYIQHRIYVIDEMVQLLWKLPYSKRA
LRSYHVREEEPRQIQMVTALLIHLIHCSANLPDALRKASNGNSVLEASVDASTPIKSHEA
VTEACCLFWSRVLQRFASVKTQDASELKSIIENLVTDLLTTLNLPEYPASAPILEVLCVL
LLQNAGPKSKDVSARTMAIDILGIIAARLKRDALVCSQEKLWILQDFLSPDAHAEHQAKD
ICCVCLGGRVENLFTCHGCQRLFHADCLGIKEHEISSRNWSCQTCICHKQLLVLQSCCNS
QNKNNLKKNSKASKDSEVSMHDIVQQLLLNYLQDVTSPDDLHLFICWFYLCLWYKDDSNC
EQKSIYYIARMKSKIIVRDSGAVSSMLTRDSIKKITLALGQNSSFCRGFDKILHTLLASL
RENSPVIRAKALKAVSIIVEADPEVLGDKRVQSAVEGRFCDSAISVREAALELVGRHIAS
HPDVGFKYFEKIAERIKDTGVSVRKRAIKIIRDMCTSDANFSGFTRACTEIITRVSDDEA
SIQDLVCKTFSEFWFEEPHGSQTQSFGDGSTVPLEIVKKTEQIVQMLRGMPNNQLLVTVI
KRNLALDFLPQSAKATGINPVSLATVRKRCELMCKCLLEKMLQVEEMNSDEVEVRALPYV
LLLHAFCLVDPTLCAPASNPSQFVVTLQPYLKTQVDNRMVAQLLESILFIIDAVLPMLGK
LPPIIVGELEQDLKQMIVRHSFLTVVHACIKCLCSASKMSGKGAVVVEQLVQFFFKCLDT
QAVDNKQKVGRSLFCLGLLIRYGNRLLANSSNKLVDFGSSVRLFIKHLSAEDFVVKVRSL
QALGFVLIARPEYMLESYVGKILEETLSSAADTRLKIQGLQNMYEYLLDAESQMGTDKGD
DNVAGYTVGAGQIVPVAAGAGDTNICGGIVQLYWDNILGRCLDFNEQVRQSALKIVEIVL
RQGLVHPITCVPYLIALETDPLESNSKLAHHLLMNMNEKYPAFFESRLGDGLQMSFMFMQ
SISGGSENVDTKIQSKMPISGKGKPEAGPLAQAKLGVSRIYKLIRGNRVSRNKFLSSIVR
KFDNPRWNKLVIAFLTYCTEVLALLPFISPDEPLYLIYAINRIVQVRAGPLEANFKAWSS
SISNYGTPYGNGMHQQAPEESTVTTQVMSVDLNGSIQQNIDAHLNSNDLRSLDLNGSNHQ
QLDYSYMGSPDTNPHSTGYTDFYFSKDDLEKVQADCLSAIALQLLLKLKRHLKIMYSLDD
ARCQAYSPTELPKPGEVISRQNIGFSIGESQFSLPTTPQELVQRYQEFKHALREDTVDYS
HYTANIKRKRPTSTPRKVQARKAVYVSSGNYNEEDDDADYSGGSTMRHITFSGSRRSSLR
SSRQY
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcccagacacttccgacgccggtgccgccgcggccttctccggctcccgaggc
atcggcctttccaacaccgtccactccgagctcgccgcctgcctcccgctgccgtcgctc
ccggttttctgcggcgcctccgaccaggacctccgcctcgttgactcgccggcgcgtctc
aatcgcgtagacgtgctcgcgcagtccggcaagatcgccgagctgcttcgccacaccgat
gtgtcgtacttgaatttaagagatgaagccaaaggtgttccttatatatatgttgagcct
ttagaactccatgatgaagttctcaggtgcaatcctgaagcatttgaatacagcactgca
ggtcctgttaaggagcagatctctggcagtgcagtacctgaaaagaggcaatctgaatca
agtttttctgtcccaagtcagactcagaaagactataatgcaacacatagtcgccagctt
gataatttttcgacaaatgatatttccacgttgtcttctaaaaaatcaaaagtaaaaaag
aaaggtggcgatggaatatctatagcacctgattctgctgagcttcaaggtgcccacatt
caaaagttttgtgagcttttggaggacttatgcagcaaatccgaactaaatagtgatgac
agagatgaagcagaatggttgtcactgcctctttctgatcttagattacttgtcaatgaa
ataacatctattcgtgaaaagaaacttctgcatttggttcccatagaagtccttgttaga
ctattaaaagttctagatcaccagatacatagagccgagggcttgtcaatcgaggaatgt
gataatagttcagattcagaattagtttcatctgtttttattgcgttggagtccattcat
gctgcattagcagtgatggctcatactgatatgccaaagcaactttataaagaagagata
attgagagaattctggagttttctaggcgtcagataatggatgttatgtgtgcatgtgac
ccatcatatcgggccttacatagacctggtgaaaacactggatttgaagtagatgattat
gaagaaaatgatgttgaatttggttcagcgagcaagaaacgacgcactaacaagactttg
aagttgaagaaatcggcatcaagcagggtctctactgctgtgaatactatccttcagaag
ttatgcactgttcttgggcttctcaaagatttattgttaatagagaggttatcagatagt
tgcattctacaacttgtaaaaacaagtattacaacatttttggttgataatatccagctt
ttgcaactgaaggcaatcagtttactcagtgcgatattctatttatatatacaacatcgc
atttatgtgatagatgaaatggttcagcttctatggaaattaccttattcaaaacgagct
ttaaggtcttatcatgtacgtgaggaagagccaaggcagatccaaatggttactgctttg
ctgattcatttgattcattgtagtgctaacctgcctgatgctttaagaaaagcatcaaat
ggtaattctgtattagaagcctctgttgatgctagtactccaattaaatcccacgaggca
gttacagaagcctgctgtctgttttggagtcgtgtacttcaacgctttgcaagtgtaaag
actcaggatgcttctgagctgaaatccataatagagaatcttgttaccgatttactgacg
actctaaatttacctgaatatcctgcttcagctcctattcttgaggttctctgtgtccta
ctacttcagaatgctgggccaaaatctaaggatgtctctgcacgtaccatggcaattgat
attcttggtataattgctgcaaggttgaagcgtgatgctttggtttgtagccaggagaag
ttatggatacttcaggatttccttagtcctgatgctcatgctgagcatcaagcaaaagat
atatgttgcgtctgtttagggggaagggttgaaaacctgtttacatgtcatggttgccag
aggctttttcatgctgattgcctgggcattaaagaacatgaaatttcaagccgaaactgg
tcctgccagacatgcatctgtcataagcaactactggtattgcaatcatgttgcaattcg
cagaacaagaataatctgaaaaagaattcaaaagcgtcaaaggattctgaagtttctatg
cacgacattgttcaacagttacttttgaattaccttcaagatgtcacctctcctgatgat
ctgcatcttttcatttgctggttttatctttgcctgtggtacaaagatgattccaattgt
gagcagaagtctatttattacattgcaagaatgaaatcaaaaatcatagtacgggattct
ggtgctgtatcttctatgctgacaagggattcaatcaagaagattactttagctttgggc
caaaacagttcattttgccgagggtttgataaaattcttcacacgcttctggcaagcttg
agggagaactctccagttattagggctaaggctttaaaagcagtaagtatcattgtagag
gctgatccagaggtattgggagataagcgtgtgcagtcagctgttgaaggaaggttctgt
gattctgcaatatctgttagagaagcagcattggaacttgttggtaggcatattgcttca
catcctgatgtgggttttaagtattttgagaagattgctgagagaataaaggatactggt
gtaagtgttcgaaaacgagctataaaaatcattcgagatatgtgcacttcagatgctaac
ttctctggatttacaagagcttgcacagagataattacacgtgttagtgatgatgaagct
agcatccaggaccttgtttgcaaaactttcagtgaattctggtttgaggagcctcatggt
tcccaaactcagagctttggggatggtagtactgttccacttgagatagttaagaaaaca
gagcaaattgttcaaatgttaagaggaatgcccaataatcaacttcttgtaactgtaata
aagcgcaatttggcacttgattttttgcctcagtctgcaaaagccacagggatcaatccg
gtgtctcttgctacagtacgtaagcggtgtgagttaatgtgcaaatgcttgctggagaag
atgttgcaggttgaggaaatgaacagtgatgaagttgaagtgcgtgcacttccatatgtg
ttgctcctgcatgcattttgtcttgtggaccctactctctgtgcaccagcttcaaaccct
tcccaatttgttgttacattgcagccatatctgaagactcaggttgacaatcgtatggtt
gcgcagctgcttgagagtatactattcataattgatgctgtgctgcccatgcttgggaag
ttacctccaattattgttggggaacttgagcaagatttaaaacaaatgattgtccggcat
tctttcttgactgttgtccatgcctgtatcaaatgcctctgctctgcgagtaaaatgtct
ggaaagggggctgttgtggttgaacaacttgttcagttcttcttcaaatgtttggatact
caggctgttgataacaagcagaaagttggacgatctctcttttgtcttgggttacttatc
cgttatggtaatcgattgttagcaaactccagtaataaacttgttgattttggaagcagt
gtcagactgtttattaagcatctgtctgcggaggattttgttgtcaaagttagatctttg
caggcactagggtttgttttaattgctaggccggaatatatgttggaaagttatgttgga
aaaatactggaggaaacattatcctctgctgctgatactcgtcttaagattcaaggatta
caaaacatgtacgagtatcttctagatgctgaaagccaaatgggaactgataaaggtgat
gataacgttgctggttacacagtaggagctggacagattgtccctgttgctgctggtgcc
ggtgatacaaacatatgtgggggtatagttcagttatattgggataatattttgggcaga
tgtttggatttcaatgaacaagttcgtcaatcagccctgaagattgttgaaattgtgctg
cgtcaaggtcttgttcatccaatcacctgtgttccgtatctaatagcacttgaaacagat
cctctggagtcaaattcaaagttggctcatcatctcctgatgaacatgaatgaaaagtat
cctgcattttttgaaagccgcttgggtgatggacttcaaatgtcatttatgtttatgcaa
tctatcagtggtggttctgaaaatgttgacactaagatccaatctaagatgcctatttct
ggaaaagggaagcctgaggctgggccgcttgctcaagcaaaacttggggtttctcgaata
tacaagctcatccgagggaaccgggtatcaaggaacaaatttttgtcctcaattgtgagg
aaatttgataatccaagatggaataaattagtaattgctttcttaacatactgcacggaa
gtcctagcattgctgccattcatttcacccgatgagcccctttatttaatctatgctatc
aatcgaatagttcaagtaagggccggaccactagaagcgaattttaaagcctggagttca
agcatttcaaattacggtacaccttatggaaatggaatgcatcaacaggcgccagaagag
tctactgttacaacccaagtaatgtcagtggatttgaatggatcaatacaacaaaatata
gatgctcatctcaattccaatgacttgagatccctggatttaaatggatcaaatcaccag
cagctagattattcgtatatgggtagcccagatacaaacccgcattctacgggttacaca
gatttttacttctcaaaagatgatctagagaaagttcaggccgactgtttatcagcaatt
gcattgcagcttcttttaaagcttaagagacacctaaaaatcatgtatagtctggacgat
gcccgttgtcaggcatattctcctactgaactaccaaaacctggagaggttatctccaga
cagaatataggctttagtataggtgaatcccaattcagtttgcctacgacaccgcaagaa
ttggtacaaagatatcaggaatttaagcatgctttgagagaagacaccgttgattattca
cactacactgcaaatataaaacgtaagagacctacaagtactccaaggaaagttcaagct
cggaaagctgtatatgtgtcaagtgggaactacaacgaggaagatgacgatgcggattat
agcggtggaagtacgatgcggcatataacatttagcggcagccgcaggagtagccttaga
agctctaggcaatattga
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integrated database retrieval system
