KEGG   Vigna unguiculata (cowpea): 114181462
Entry
114181462         CDS       T06017                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
vun  Vigna unguiculata (cowpea)
Pathway
vun03020  RNA polymerase
vun03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vun00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    114181462
  09124 Replication and repair
   03420 Nucleotide excision repair
    114181462
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vun03021]
    114181462
   03400 DNA repair and recombination proteins [BR:vun03400]
    114181462
Transcription machinery [BR:vun03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     114181462
  RNA polymerase III system
   RNA polymerase III
     114181462
  RNA polymerase I system
   RNA polymerase I
     114181462
DNA repair and recombination proteins [BR:vun03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      114181462
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat NA-iREase1 OB_RNR_1st HEPN_AbiV
Other DBs
NCBI-GeneID: 114181462
NCBI-ProteinID: XP_027923727
LinkDB
Position
4:958557..960860
AA seq 206 aa
MVLSEEEISRLFRIRKTVMQMLRDRGYLVGDFEINMSKHQFKSKYGEHMKREDLVINKSK
KDNSGDQIYIFFPEEAKVGVKTMKTYTNRMNSENVYRAILVTQTSLTPFARTCISEISSK
FHLEVFQEAELLVNVKEHELVPEHQVLTDSEKKTLVERYTVKETQLPRVQVTDPVARYYG
LKRGQVVKIIRPSETAGRYVTYRFVV
NT seq 621 nt   +upstreamnt  +downstreamnt
atggtgctctccgaggaagaaatttcgaggctgttccgaatcaggaagacggtgatgcag
atgctgagggacagagggtaccttgtgggagacttcgagatcaacatgtccaaacaccag
ttcaaatccaagtacggcgaacacatgaagcgtgaggaccttgtcatcaacaagtccaag
aaggacaactccggcgaccagatctacattttcttcccggaggaggccaaggtcggcgtc
aaaaccatgaagacttacactaaccgcatgaactccgaaaacgtctacagagccattctc
gttactcagaccagcctcaccccgttcgcccgaacctgcatcagcgaaatctcatccaaa
tttcacttggaggtttttcaggaggcagagctgctggtgaacgttaaagagcatgagctt
gttcctgaacatcaggttctcactgactcggagaagaaaactttggttgagagatacact
gtgaaagaaacccagctacctagggttcaggtgactgatcctgttgcaagatactatgga
ctgaagcgaggtcaagttgtgaagattatacggccaagtgaaacagctggcagatatgtt
acttacagatttgttgtatag

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