Vigna unguiculata (cowpea): 114182173
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Entry
114182173 CDS
T06017
Name
(RefSeq) WD repeat-containing protein 36 isoform X1
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114182173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vun03009
]
114182173
Ribosome biogenesis [BR:
vun03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
114182173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
ANAPC4_WD40
EIF3I
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
PEP5_VPS11_N
NBCH_WD40
WD40_RFWD3
Beta-prop_VPS8
WD_LRWD1
Beta-prop_DCAF12
VPS8_N
VID27
WDCP
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
114182173
NCBI-ProteinID:
XP_027924771
LinkDB
All DBs
Position
4:complement(104022..113018)
Genome browser
AA seq
908 aa
AA seq
DB search
MGIFEPYRAIGCITTSVPFSVQRLGTETFVTVSVGKAFQIFNCAKLTLVLVGPQLPKKIS
ALASYREYTFAAYGKNIAVFKRAHQVATWSSHNAKVKLLLLFGEHIVSVDVCGNMFLWAF
KGVEDNLAPFAHIMLHEKFNPSCIMHPDTYLNKVLIGSEQGSMQLWNISTKKKIFEFNGW
NSPISCCVSSPALDVVAIGCSDGRIHVHNIRYDEELVSFTHSTRGSVTALSFSTDGQPLL
ASGGSSGVISIWNLEKKRLQSVIREAHDSVITSLHFFANEPVLMSSSADNSIKMWIFDTS
DGDPRLLRFRSGHSAPPLCIKFYANGRHILSAGQDRAFRLFSVVQDQQSRELSQRHVSKR
AKKLKLKEEEIKLKPVIAFDCAEIRERDWCNVITCHMDTAKAYVWRLQNFVLGEHILNPC
PENPTPVKACAISACGNFAILGTAGGWIERFNLQSGIRRGSYIDISESRSCAHDSEVVGV
ACDSTNTLMISAGYKGDIKVWDFKERDLKSRWEIGCSVVKIVYHRYNGLLATVADDLTIR
LFDVVALRLVRKFEGHTDRITDLCFSEDGKWLLSSSMDGSLRIWDVILARQLDAIHVDIP
ITALSLSSNMDILATTHVDQNGVYLWVNQSMFSSTSNIDSYASGREVVSVKLPSISSVER
SQDEHSEEPVNAPQPKDDLDFPTQDKQIPELVTLSLLPKSQWQNLINLDIIKVRNKPIEP
PKKPEKAPFFLPSVPSLSGEILFESEKLSLKENDETEVRKQMKTLSDMPQSRFHYLLQCS
KETDNYAAFTDYIKGLSPSTLDMELRMFQIIDDDDDDQQEAEKRSELVSIEWLLDYFIHE
LSCRNNFEFLQAVIRLFLKIHGETIRQQSCLQEKARKLLDIQCMVWQRVDKLFQSSRCVV
GFLSNSQI
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgggtatatttgaaccttacagggcaattggatgcatcacaaccagcgtcccgttctct
gttcagagactcggtactgaaactttcgttactgtcagcgttggaaaggcttttcagatt
tttaactgtgcaaagctcactctagttctagttggtcctcagctgccgaagaagattagt
gcgcttgcatcttatcgcgaatacacttttgctgcgtatggaaaaaacattgcagtgttc
aagcgtgcacaccaggttgcaacttggagcagccataatgctaaagttaagttgctcctg
ttgtttggagaacatattgtcagtgtggatgtttgtggcaacatgttcttgtgggcattt
aagggagttgaagataaccttgctccgtttgcgcacattatgctgcacgagaaatttaac
cccagttgtataatgcatccagatacttacctgaataaggttcttattggaagtgagcaa
ggttcgatgcagctttggaacattagcacaaagaaaaagatttttgagtttaatggatgg
aattcacccatatcctgttgtgtttcatcccctgccttggacgttgttgctattggctgt
tcagatggaaggattcatgttcacaacattcgttatgatgaagagttggtttcatttaca
cattctacacgtggttcggtgactgccttatctttcagcactgatgggcaacctcttcta
gcttctggaggttcatctggtgttataagcatatggaatctggaaaagaaaagactccag
tcagttataagagaggctcatgatagtgtgatcacctcgctacatttttttgccaatgaa
ccagtgctaatgagttcatcagcagacaactctattaaaatgtggatatttgatacaagt
gatggtgatcctcgccttctgcgcttccgaagtgggcatagtgcacctcctctttgcata
aagttttatgccaacggaagacatattctttcagccggtcaggatcgtgcctttcgcctg
ttctctgtagttcaggatcaacaaagcagggagctttctcaaagacatgtttctaaacgt
gctaagaaactgaaattgaaggaggaagaaataaaattgaagcctgtgattgcatttgat
tgtgctgaaattagagaacgtgactggtgcaatgtgattacttgtcatatggatactgcc
aaggcatatgtttggagacttcaaaactttgttcttggtgagcacatattgaatccatgt
cctgaaaatccaacacctgtaaaggcttgtgctatcagtgcttgtggcaattttgccatt
ctagggacagcaggtggttggattgaaaggtttaaccttcaatctggaattcgcaggggt
tcttacattgacatttcagaatcaagaagctgtgctcatgatagtgaagtagttggagtt
gcttgtgactcaacaaatactctcatgattagtgcaggatacaaaggagatataaaggtt
tgggatttcaaagaacgtgatcttaaatccagatgggagattggctgttcagttgttaag
attgtgtatcatcgttataacggtctcctggctacagtagcagatgatttaacaattaga
ttgtttgatgtggtggctcttagacttgtgcgtaaattcgaaggtcacacggatcgaata
acagatttgtgcttcagtgaggacgggaagtggcttctgtcatctagtatggatggaagt
cttagaatttgggatgtaatcttagcaagacagttagatgcaatacatgttgatatacct
atcacggcgttatctctgtcctcaaacatggatatattagcaactacccatgttgatcaa
aatggggtatacttgtgggtaaaccagtcaatgttctctagtacttcaaacatagattcg
tatgcaagtggaagagaggttgtgagtgtcaaattgccatctatttcttctgtagaacgt
tctcaagatgagcattctgaagagccggtgaatgcaccccaacctaaagatgacctggat
ttcccaactcaagataagcaaatacctgagttggttacactttcattgctgcctaagagc
cagtggcagaacttgatcaacttagacattataaaggttcgcaataagcctattgagcct
ccaaaaaaacctgaaaaagctccattcttcttgccttctgttccatccctctctggggaa
atattgttcgagtcggaaaagttgtcattgaaggagaacgatgaaacagaggttaggaaa
caaatgaagacattatcagatatgccacaatcacgttttcattatcttcttcaatgctca
aaagagacagacaactatgcagcgttcactgattatattaaaggattatctccatcaact
ctggatatggagcttcgaatgtttcagatcattgatgatgatgatgatgatcagcaagaa
gcagagaagagatctgagttggtatctattgaatggcttctggattattttattcatgaa
ctttcctgcagaaataatttcgagtttctacaggctgtcatcaggctatttttaaagatt
catggtgagacaattcggcagcagtcatgcttacaagaaaaggcaaggaaacttcttgat
attcaatgcatggtatggcaaagggtagataaattatttcaaagttcgagatgtgtggtc
ggctttcttagtaattctcaaatttag
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