KEGG   Vigna unguiculata (cowpea): 114182967
Entry
114182967         CDS       T06017                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
vun  Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:vun00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vun03009]
    114182967
Ribosome biogenesis [BR:vun03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    114182967
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz EIF3I Beta-prop_TEP1_2nd Beta-prop_EML WDR55 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_CAF1B_HIR1 Beta-prop_DCAF4 ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_Vps41 WD40_MABP1-WDR62_2nd Beta-prop_IP5PC_F WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_WDR75_2nd WDR54 Beta-prop_SCAP Beta-prop_LRRK2 WD40_RFWD3 Beta-prop_VPS8 Beta-prop_IFT122_1st Beta-prop_EIPR1 Nucleoporin_N Beta-prop_WDR19_2nd Vps54_N
Other DBs
NCBI-GeneID: 114182967
NCBI-ProteinID: XP_027925581
LinkDB
Position
5:complement(2228898..2234174)
AA seq 447 aa
MEVVLASSSLDGGIGCWDLHTGAEQLRYKSCSSPSHGLVAVGPRFIASSQLREPSATSGS
VLFWSWSKPQVEVKSFPAEPIKPLASNHLGTFIAGGALSGDIYLWEVETGRLLKKWRAHI
RAVTCLVFSEDDSLLVSGAEDGTVRVWSLFMIFDDFRGQQANNLYEYSFTGHSLHVTDVV
IGNGGCSAIIVSASEDRTCKVWSLSRGTLLRNIVFPSVIDSIALDPAEHVFYAGSRDGKI
FIAALNTESDASNNHGMHIIGSFSNQSKTVTCLAYSTSQNLLISGSEDGKVRVWDARTRR
IVRLFKHAKGPVNNILVVRRENSSNHISSNVQPSSRKQGNLPPPLEKYANSIHEDSDMNT
TISLGGGRSSLNPSYLSSHVISNYIKELQHQGSAAASEMETEKLKHDYQRAMQMANQWKN
MYENLNKFCVNELLDGSQARTLDENHN
NT seq 1344 nt   +upstreamnt  +downstreamnt
atggaggttgttttggcgtcgtcgtctttggacggcggaataggatgctgggatcttcac
accggtgcggagcagctccgctacaaatcttgctcctccccttctcatggccttgtcgcc
gttggtcctcgcttcatcgcctcctctcagcttcgagaaccttcagcgacatctggttct
gttctcttctggtcctggtccaagcctcaagttgaagtgaagagttttcccgctgaacct
attaaaccccttgcttctaatcacctgggaaccttcattgctggtggagctttatctggg
gatatctatttgtgggaagttgaaaccggtagattgcttaagaagtggcgtgcacatatt
agggccgttacttgtctggttttttctgaagatgactcgttgttggtatctggtgctgaa
gatggaaccgtaagagtttggtctctcttcatgatattcgatgatttcagaggtcagcag
gctaataatctttatgagtatagttttaccgggcactccctgcacgtgactgatgttgtg
attggtaatggagggtgcagtgcaattattgtgtcagcttcagaggatcgaacttgcaag
gtatggagcttatctaggggaacactactaagaaatatagtattcccttcagttattgat
tccattgcactggatccagctgaacatgtcttttatgctggcagtagagatggaaagata
tttattgctgcacttaacactgaaagcgatgctagtaataatcatggaatgcatatcatt
ggttctttctctaaccaaagcaagacagttacttgcttagcatatagcacgagtcagaat
ttattgatatccgggtcagaggatggaaaggttcgtgtttgggatgcaagaactcgtcga
atcgtccgcttgttcaaacatgctaaagggcctgtaaataatattcttgttgttagacga
gaaaactcaagtaatcacatatcttctaatgtacaaccatcatcaagaaagcaaggaaat
ttaccccctccattggaaaaatatgcaaattcaatacatgaagactcagatatgaacact
actatcagtcttgggggtggcaggagttccctaaatccttcatacctcagttctcatgtg
atatctaattacattaaggaacttcagcatcaaggatcagctgctgcttctgaaatggag
acagagaaactaaaacatgattaccaaagggcaatgcaaatggctaaccaatggaagaat
atgtatgaaaacttaaataaattttgtgttaacgaactgttggatggtagtcaagccaga
accttagatgaaaatcacaattga

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