Vigna unguiculata (cowpea): 114183033
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Entry
114183033 CDS
T06017
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03013
Nucleocytoplasmic transport
vun03015
mRNA surveillance pathway
vun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114183033
09122 Translation
03013 Nucleocytoplasmic transport
114183033
03015 mRNA surveillance pathway
114183033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vun03019
]
114183033
03041 Spliceosome [BR:
vun03041
]
114183033
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
114183033
Spliceosome [BR:
vun03041
]
Common components
Common spliceosomal components
Cap binding complex
114183033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
114183033
NCBI-ProteinID:
XP_027925668
LinkDB
All DBs
Position
5:complement(40376363..40379833)
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AA seq
257 aa
AA seq
DB search
MALLFKDPSKLSAYRDRRFPGTQEDFEHALQNSTTVYVGNMSFYTTEEQVYELFSRAGEI
KKIIMGLDKNTKTPCGFCFVLYYSREDTEDACKYISGTILDDRLIRVDFDWGFQDGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEVQRQLVDYGTGSLGSFPPVIPSSYGRHG
GGHGHGHGHGGSHRHGRDYYRKRHRDDDRHTHESSKRNSDHESRRNTDHESRPEKNPRFR
ESGDSDDDEDDDRKRRA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgttattcaaggatccgtcgaagctttcggcgtatcgagacagaagattcccc
ggaacgcaagaggattttgagcatgcgcttcagaattcaaccaccgtttacgttgggaac
atgtcgttttacacaacggaggagcaagtttacgagctcttctctcgcgctggggaaatc
aagaagatcattatgggtttggacaagaacaccaaaacaccctgtggcttctgtttcgtt
ttatattattctcgtgaagataccgaggatgcttgcaaatacataagtgggacgatactg
gatgatcgtcttattcgtgttgattttgattgggggttccaggatggtagacaatggggt
cgtgggaggagtggtggccaggtccgggacgagtatcgtactgattatgatcctggtaga
ggaggttatgggaagctggtccagaaagagttagaagtacaaaggcagcttgtagattat
ggcactggttctttgggttcttttccaccagttattcctagttcctatggtagacacggt
ggaggtcatggtcatggacacggtcatggtggttctcatcgccatggtagagattactat
agaaagagacaccgagatgatgatcgccacacacacgagtcctcaaaaagaaattcagat
cacgaatctcggaggaacactgaccatgaatctagaccggaaaaaaatccacggtttcgt
gagagtggtgattctgatgatgacgaggatgatgatagaaaaagacgggcttaa
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