Vigna unguiculata (cowpea): 114183328
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Entry
114183328 CDS
T06017
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03082
ATP-dependent chromatin remodeling
vun03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114183328
03083 Polycomb repressive complex
114183328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vun03036
]
114183328
Chromosome and associated proteins [BR:
vun03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
114183328
Histone modification proteins
HAT complexes
HATB complex
114183328
HDAC complexes
Sin3A-HDAC complex
114183328
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
114183328
PRC2.2
114183328
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
114183328
Heterochromatin formation proteins
Other heterochromatin formation proteins
114183328
Chromatin remodeling factors
NuRD complex
114183328
NuRF complex
114183328
NuRF complex (fruit fly)
114183328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
eIF2A
WDR90_beta-prop_4th
Beta-prop_DCAF12
Beta-prop_SPT8
WD40_RFWD3
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
114183328
NCBI-ProteinID:
XP_027926106
LinkDB
All DBs
Position
5:46592876..46598480
Genome browser
AA seq
457 aa
AA seq
DB search
MKEKEKEKEKVEERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRHRLYL
SEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEESRSPFVKKFKTILHPGEVNRIREF
PQKSQIVATHTDSPEVFIWDVEAQPNRNAVLGAATSRPDLVLTGHKDNAEFALAMCPSEP
FVLSGGKDKCVVLWSVHDHISTLAVEEAPTVKQGSKSGGNNAKATESPTIGPRGIYQGHT
DTVEDVQFCPSSAQEFCSVGDDSRLILWDARVGSAPVVKVDKAHNADLHCVDWSPHDSNF
ILTGSADNTVHMFDRRKLKSSGVGSPVYKFKGHDAAVLCVQWSPDKSSVFGSAAEDGILN
IWDYEKVGKTTDSAGSKSPNTPSGLFFRHAGHRDKVVDFHWSACDPWTIVSVSDDCESSG
GGGTLQIWRMMDLIYRPEEEVLTELDKFRSHIFGCNS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagaaggagaaagagaaagagaaagtggaagagaggtacacgcagtggaagtct
cttgttcccgttctctacgattggcttgccaaccacaacctcgtttggccttctctttct
tgcagatggggtcctcaactggaacaagcaacctacaagaaccgtcaccgtctctatctc
tctgagcagactgacggaagtgttcccaacactctcgttatagccaactgcgaggttgtt
aaacccagggttgctgctgctgagcacatctctcagtttaacgaagaatcacggtctcct
tttgtaaaaaagttcaaaactatactacatcctggcgaggtaaatagaatcagggaattt
ccacaaaaaagtcagatagtagctactcacacagatagtcctgaggtatttatatgggat
gttgaagctcagccaaatcgaaatgctgttctgggggctgccacttctcgtcctgacctg
gtattaactggccataaggataatgctgaatttgctttggctatgtgcccatctgagccc
tttgtactttctggagggaaggacaaatgtgtggttttatggagtgttcatgatcatatt
tcaactttagctgttgaagaagcacccactgttaaacagggctctaaaagtgggggaaat
aatgcaaaagctacagaaagccctactattggaccaaggggcatctaccagggtcatacg
gacactgttgaagatgtgcaattttgcccatcaagtgcacaggagttctgtagtgttggt
gatgattctcgtcttatactctgggatgcacgagttggatctgctccagttgtcaaggtt
gacaaagcacataatgcagatcttcattgtgttgattggagtcctcatgactcaaatttt
atactaactggttctgcggataatacagtccacatgtttgatcgtcgaaagcttaaaagt
agtggagttggatcgcctgtttataaatttaaaggtcatgatgcagcagtcctctgtgta
cagtggagtcctgacaagtcatctgtatttggtagtgctgctgaagatggtattttaaat
atctgggactatgaaaaggttggtaaaacaactgattctgctggttcaaaatcaccaaat
accccctctggtttattctttcgacatgctgggcatagggacaaggttgttgacttccac
tggagtgcatgtgatccgtggacaattgttagtgtctctgatgattgtgaaagtagtggt
ggcggtggcaccttacagatatggcggatgatggatctcatatatcgaccagaggaggag
gtgctcactgagctggataagttcagatctcatatttttggatgtaactcgtga
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