Vigna unguiculata (cowpea): 114183883
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Entry
114183883 CDS
T06017
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 3
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vun01009
]
114183883
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vun03021
]
114183883
Enzymes [BR:
vun01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
114183883
Protein phosphatases and associated proteins [BR:
vun01009
]
HAD phosphatases
Fcp/Scp phosphatases
114183883
Transcription machinery [BR:
vun03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
114183883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_CPL3
NIF
BRCT
PTCB-BRCT
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
114183883
NCBI-ProteinID:
XP_027926851
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All DBs
Position
5:1701460..1707752
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AA seq
1275 aa
AA seq
DB search
MVFGSLLDCQKLGKLEKMVKGVEDVEEGEISDTASVEEISEADFNKQDVKVNNNNKPNGS
DARVWAVRDLYSKYPTICRGYASGLYNLAWAQAVQNKPLNDIFVMELDSDANANGNNNSN
RPSSVSVNPKEVVVVDMDKEEGELEEGEIDADADPETEAESAVAASVVSETVSDSEQFGV
KKGVSDSEQLGVRDVLEGVTVANVAESFAQTSSRLLNTLPEVFSRPADSEKDDLMRLSFN
AIEVVYSVFRSMDSSDKEQNKDSILRLLSSVNDQQQAQLFSPEHIKEIQGMMTAIDSVGA
LGNSEAIYIKTESQTPEIKSQENSALEVQTHGINIQENQAVEVSALISSIKPLHSDIIGG
SRALKFGQNSIKGRGVLLPLLDLHKDHDADSLPSPTREAPSCFPVNKLLSVGEATVKSGS
AAKMQPGKMEVDSEGCKFHLYETDALKAVSTYQQKFGRSSLFTNDELPSPTPSGDCDDMV
VDTNEEVSSASTGGFLTSTKPTLIDQPPVSATSMDNSRMLGLINSRVDAAGPGSFPVKSS
AKSRDPRRRLINSEASAVDNQSIVINNMPKVEYAGSTMSRKQKAVEEPFDVTVSKRLKSS
LENIEHNSSQVRTIAGTGGWLEDNTGPGTQLVEKNNLMDKFAPEPKKTLNTVSSTSSGSV
SFNATNIRNEQAPLASSNIPSSLPAILKDIVVNPTMLLGLIFEQQNRLRNAVNKSSDSAT
NMLLHPTSSNSATGTDSTVSIGSSIATALQTSVGMLPVSSQSASTAQSLQDDHSGKIRMK
PRDPRRILHTNNSVQKSGNIVNELHKAIVSPVPNSQVTGNNVNTQKLEGRVDTKLVPTQS
GAAPDITRQFTKNLKNIADIMSISQESSTHSTAAQSFSSASVPLNIDRGEQKSVVSNSQN
LQAGIVGPAQEICAPGTSRSQNTWGDVEHLFEGYDEQQKAAIQRERARRIEEQNKMFAAR
KLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGI
WNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDTDSVDGEERAPK
SKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLPGPSLLEIDHD
ERPEAGTLASSLAVIERIHQNFFASQSLEEVDVRNILASEQRKILAGCRIVFSRVFPVGE
ANPHLHPLWQTAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASA
LLYRRANEQDFAIKP
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggttttcggatcgttgttggattgtcagaaattgggaaaattggagaagatggttaag
ggggttgaggatgtggaagagggcgagatttcggatactgcttcggtggaagagatttca
gaagcggatttcaataagcaagatgttaaggtgaataataacaataagcccaatggaagt
gatgctagggtttgggctgttcgtgatctttactcaaagtaccctactatttgccgggga
tatgcttcgggtttgtataaccttgcttgggcacaagccgtgcagaacaagcctttgaat
gatatttttgtgatggaactggattctgacgccaatgctaatggtaacaacaactccaat
cgaccgtcttctgtttcagtgaatcctaaagaggtggttgttgtggatatggacaaagag
gaaggggagttggaggaaggtgagattgatgccgacgctgaccctgaaacagaggcagag
agtgctgtggctgcttctgttgtttcagagaccgtttctgattctgagcagtttggtgtg
aagaagggtgtttctgattctgagcagcttggtgtgagggatgttctggagggtgttaca
gttgctaatgtggcggagtcatttgctcaaacttccagtaggctgcttaatacccttcct
gaggtgttctctagacctgctgattctgagaaggatgatctcatgcgattgtcatttaat
gcaattgaagtggtttattctgtatttcgctctatggactcttcggacaaggaacagaac
aaggatagcattttaagattactttcttctgttaatgatcaacaacaggctcaattattt
tctccagagcatataaaagagatacagggcatgatgactgcaattgattctgttggtgct
ttaggaaatagcgaggctatttacattaagacagaatctcagaccccggagataaagtct
caggaaaattcagctttagaagtgcagacccatggtataaatattcaggaaaatcaagca
gttgaagtatctgcattgatttcttctattaagcctttgcatagtgacataattggggga
tcacgggctttaaaatttggacaaaatagtattaaaggtagaggagttctgctccccctg
ctagaccttcacaaggatcatgatgcagacagtttaccctcaccaacccgagaggcacct
tcctgcttccctgtgaataaattactttctgttggagaggccacggttaaatctggttca
gcagctaagatgcagcctgggaagatggaagttgacagtgaaggttgtaaatttcatctg
tatgaaactgatgctttgaaagctgtttccacatatcaacagaagtttggtcgaagttcc
ctttttacaaatgatgaacttccaagtccaactccttcgggtgactgcgatgatatggtt
gttgatacaaacgaggaggtctccagtgcatctactggtggttttttaacaagcactaag
ccaacccttatagatcagccacctgtttctgctacttccatggataactccagaatgctt
ggattgattaattctagagttgatgcagcaggtccggggtctttccctgtgaaaagctcg
gcaaagagtagagatcctaggcgtcgacttattaattctgaagcaagtgctgtggataac
cagtccattgtgataaataatatgcctaaagtggaatatgctggatcaacaatgtcaagg
aaacaaaaggctgttgaggagccttttgatgtaactgtatcaaaaagactaaaaagttca
ttggaaaatattgagcataattcgagtcaagtaagaactatagctggaactggaggttgg
ttggaagataatactgggcctgggactcagttggtagagaagaataatttaatggacaaa
tttgcacctgaacccaaaaagactttgaatacagtcagtagcacttcttctggttctgtt
agtttcaatgcaacaaacattagaaatgaacaggcgccacttgcaagtagtaatataccg
tcttccttacctgctatattgaaagatatagttgtaaatccaaccatgttgctaggctta
attttcgagcagcaaaacagattaagaaatgccgtgaataaatcttctgattctgctaca
aatatgctgctgcatccaacaagctcaaattcggcaacgggaacagactccactgtgagt
attggttcatcaatcgccactgctcttcaaacttctgttggaatgcttccagtttcatca
caatcagcttctacggcacaaagccttcaagatgatcattcaggaaagattcgcatgaaa
ccccgtgatccaaggcgcattctacacactaataactctgttcaaaagagtgggaacata
gtgaatgagctacacaaagccattgtatcccctgtgcctaacagccaggtaactgggaac
aatgtcaatacccagaagctggaaggcagagtggatactaaattagtacctactcaatca
ggtgcagcacctgatattactcggcaattcaccaagaatctgaaaaacattgctgatatt
atgtctatttcccaagaatcatctactcactctactgcagctcaaagtttttcttctgca
tctgtcccccttaatatagatagaggggagcagaaatctgttgtgtcaaactctcagaac
ttgcaagctggcatagtaggaccagctcaggaaatatgtgcacctggtacctcccgatcc
cagaatacatggggagatgttgaacatctttttgaaggttatgatgagcagcagaaggct
gctattcagagggagagggcaaggaggatcgaagaacagaataaaatgtttgccgctagg
aaattgtgtcttgtattggacctagatcacacactacttaattctgccaagtttgtggaa
gttgatcctgtgcatgacgaaatattgagaaaaaaagaagaacaggaccgtgagaagcct
cacagacatctttttcgctttcctcatatgggaatgtggactaaactcagaccaggaatc
tggaacttcttggagaaggctagtaagctctatgagctacatctttacactatgggaaac
aaactatatgcaacagaaatggcaaaggtacttgatccaaagggagttctgtttgctgga
agagttatttctagaggtgatgatactgattcagttgatggcgaggagagggctcccaaa
agcaaagatttggaaggcgttttgggaatggaatcagcagttgtaatcatagatgattct
gtgagggtttggcctcataacaaactgaacttgatagtggtggaaaggtatacgtacttc
ccctgtagtagacgtcagtttggattgcctggtccttcccttcttgagattgatcacgat
gagagacctgaagctggaactctggcttcctctttggcagttattgagagaatacatcaa
aacttttttgcttctcaatccttagaagaagttgatgtcagaaatatactagcgtcagag
cagagaaaaatcttagctggttgtcgtatagtatttagtagggtgtttcctgttggtgaa
gcaaatcctcaccttcacccattgtggcagacagctgaacagtttggtgctgtgtgcacc
aaccagattgatgaacaagttactcatgtagttgcgaattccctggggactgataaggtg
aattgggctctttccactggaagatttgttgtccatcctggctgggtggaggcatcggca
ttgctatataggagggcgaatgagcaagattttgccattaaaccataa
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