| Entry |
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| Name |
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7-like
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| KO |
| K12815 | pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:5.6.2.6] |
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| Organism |
vun Vigna unguiculata (cowpea)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:vun00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114184772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:vun03041]
114184772
Enzymes [BR:vun01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114184772
Spliceosome [BR:vun03041]
Complex C
Other components
Step II factors
114184772
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
5:complement(45110657..45117455)
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| AA seq |
1065 aa
MDSVSSSKVHKRRHSRDDSRIGSGKVTQRTYYESKGESYSERDSHSRYDHDDGTKRRRYE
DSWRTPVNSSSPWDHVSPSLVPIRASGYSAKSSVSRHNERLNQLNSSETSNTFQVEMADK
SELGEEHKYGITENMRLEMDYDADRAWYDREEGSTLFEDDSSSLFLGNEASCQKKEAELA
KRLVRRDGTGMSLAQSKKLSQLTADNARWDDRQLLRSGAVRGTEVQTEFDDEEEHKVVLL
VHDTKPPFLDGGVVFTKQADPIMPIKDPTSDMAIISRTRSTLVREIHEKQSMNKSRQRFW
ELAGSKLGDILGVEKTAEQIDVDTAEVGEDGEIDYKDETKFSQHLKKAEAVSDFATSKTI
AEQRQYLPIFSVREELLKVVRENQVVVVLGETGSGKTTQLTQYLHEDGYTVGGIVGCTQP
RRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPSTIIKYMTDGVLLRETLKDSDLDK
YRVIVMDEAHERSLNTDILFGILKKVVAQRRDFKLIVTSATLNAQKFSNFFGSCPIFHIP
GRTFPVKILWSKTPVEDYVEGAVKQAMTIHITSPPGDILIFMTGQDEIEAACHALAERME
QMMSSSNKLVPKLLILPIYSQLPSDLQAKIFQKAEDGARKCIIATNIAETSLTVDGIFYV
IDSGYGKMKVYNSRMGMDALQVFPVSRAAAEXRAGRAGRTGPGTCYRLYTESAYLNEMLP
SPVPEIQRTNLGNVVLLLKSLKVENLLDFDFMDPPPQDNILNSMYQLWVLGALNNVGGLT
DLGWKMVEFPLDPPLAKMLLTGKLLGCVEEVLTIVSMLSVPSVFFRPKDWAEESDAARER
FLVPESDHLTLYNVYQQWKQHDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKTLKIPLT
SCWPDTDIVRKAICSAYFQNAARLKGVGEYVNCRNGMPCHLHPSSALYGMGCTPEYVVYH
ELVLTTKEYMQCATAVEPQWLAELGPMFFSVKESDISLLEHKKRQKEEKTAMEEEMENLK
KVQAEVERERKQKEKERTAKHQQQISMPGLRKGSSTFFRPKKFGL |
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| NT seq |
3198 nt +upstreamnt +downstreamnt
atggattcggtatctagttccaaggttcacaagaggaggcattccagggatgattcaaga
attggcagtgggaaagtgacacaacggacatactatgagagtaagggagaatcttattca
gaaagggattcgcatagtagatatgaccatgatgatggtacaaagcgaaggagatacgaa
gattcctggagaacacctgttaattcatcttccccctgggaccatgtttctccatctcta
gtcccaatacgtgcttctggatattcagccaaatcttctgtttctagacacaatgaaagg
ttgaaccagcttaattcatcagaaacttcaaatacgtttcaggttgaaatggctgataag
tctgaattgggtgaagaacacaagtatgggattacagaaaacatgcgtttggagatggat
tatgatgctgaccgagcatggtatgacagagaggaaggtagcacattgtttgaagacgac
agctcatcactttttcttggaaatgaagcttcctgtcagaaaaaagaggctgagttagca
aagagactggttagaagagatggaaccggtatgtcccttgcgcagagcaagaagttgtcc
cagctcacagctgataatgctcgatgggacgataggcaactgcttagatctggagctgtt
agaggtacagaggttcagactgaatttgatgatgaggaagagcacaaagttgttctactt
gttcatgatacaaagcctcctttccttgatggcggagttgtctttactaagcaggctgac
ccaattatgcctataaaagatccaacatctgacatggctataatatctcgtacaaggtct
actctggttagagaaatccatgagaagcagagtatgaacaagtctcgccaacgcttttgg
gaacttgcaggctcaaaacttggtgatatcttgggtgttgagaaaacagcagagcagatt
gatgtagacactgctgaagtgggtgaagatggtgaaattgattataaggatgaaactaag
ttttcacagcatttgaagaaggcagaagctgtgagtgactttgccacgtcaaaaactatt
gcagagcaaagacaatatctccctatattttcagtgagggaagagttattaaaggtggtt
cgggaaaatcaggtggtggtggtgcttggagaaactgggtcaggaaagacaactcaatta
acacagtatctgcatgaggatggttataccgtaggtggtatagtgggttgtacccaacca
agacgtgtagcagctatgagtgttgccaagagagttagtgaagagatggatacagagttg
ggtgataaagttggctatgctatacgttttgaagatgtaaccgggccaagtaccattata
aagtacatgactgatggtgtacttctacgagaaacactcaaagactctgatctagacaaa
tatagggttattgtcatggatgaagctcatgaaagatcattaaatactgatattcttttt
ggaatattgaagaaagttgtagcccaacgccgtgatttcaagcttattgtcacatctgct
actctgaatgcacagaaattttcaaatttctttggaagttgtccaatttttcacattcct
gggagaacatttcccgtgaaaatattgtggagtaaaactccagtcgaagattacgtagaa
ggtgcagtgaagcaggctatgactattcatataaccagtcctcctggtgacatccttatc
ttcatgactggccaggatgagattgaggcagcttgccatgcccttgcagaaagaatggag
cagatgatgtcgtcgtcaaataaacttgttcctaaactcttgattcttcccatatactct
cagcttccttccgacttgcaagctaagatatttcagaaagctgaagatggagcgcgaaaa
tgtattatagccactaatattgccgagacatcattaactgttgatggtatcttctatgtg
atagactctggctatggtaaaatgaaggtgtataactctaggatgggcatggacgctctc
caggtcttccctgtaagccgagctgctgctgaannacgtgctggtcgagctggtagaacc
ggccctggtacatgctataggttgtatactgagagtgcttacttgaatgaaatgctgcca
agtcctgttccagagattcagaggactaaccttggtaatgttgtcctgttgctgaaatct
ctgaaagttgaaaatctacttgattttgatttcatggatccacctccgcaagataatatt
ctgaattcgatgtaccagttgtgggtgctgggtgcacttaacaatgtggggggattaact
gatcttggatggaaaatggttgaattcccactggatcctccgcttgcgaagatgcttttg
acgggtaaactgttggggtgtgttgaggaggttttgacaattgtgtccatgctttcagtg
ccctctgttttctttagacccaaggattgggcagaggagagtgacgccgcacgggagaga
tttttggtgccggagtccgatcatttaaccctgtacaatgtttatcagcagtggaaacag
catgattacagaggtgattggtgcaatgatcatttcttgcatgtgaaaggtctaagaaag
gctagagaggtgagatcccagttgttggatattctgaagactttaaagatccccttaacc
tcatgttggcctgacacagacattgttagaaaagcaatttgttctgcatattttcagaat
gcagcaaggttaaagggcgtgggagagtatgttaactgcaggaatgggatgccatgtcat
cttcatcccagtagtgctctctatggtatgggatgcactcctgagtatgtggtttatcac
gagttagtattgaccacaaaggagtacatgcagtgtgccaccgcagtggaaccccagtgg
ctggctgagttgggacctatgtttttctctgttaaggagtctgatatatcgttactggag
cataagaagagacagaaagaagagaaaacagccatggaggaggagatggagaacttgaag
aaggtacaagcagaggtcgagagagaaaggaaacagaaggagaaggaaaggacagctaag
catcagcagcagatctccatgccaggtttacgaaagggttcttccacattttttagacca
aagaagtttggtttgtaa |
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