Vigna unguiculata (cowpea): 114184807
Help
Entry
114184807 CDS
T06017
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun00040
Pentose and glucuronate interconversions
vun01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114184807
Enzymes [BR:
vun01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
114184807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
114184807
NCBI-ProteinID:
XP_027927915
LinkDB
All DBs
Position
5:complement(3706697..3708640)
Genome browser
AA seq
452 aa
AA seq
DB search
MAGSSCKVAIVLVAFAITIPCLEGGIGTMDEFLKERAMEAHEIALKSYVPDPTNVTSQHN
NLHVKETTRKKPKKESNSTTTTRREMTEEKDKKKYKGPCLALNPIDRCWRCKKSWAKNRF
KLASCVKGFGRRATGGSKGKIYTVSDPSDDDPVDPKEGTLRYGVLQKDPLWIIFSKSMII
KLNYELLISSDKTIDGRGHTVVIKGGAGLTMQFVNNIIIHGLKIHHIKSTPGGMIRDSWD
HVGTRTRADGDAISIFGSSNIWIDHISLSECEDGLVDIIQGSTAITVSNCHMTKHNDVML
FGASDTFSGDKIMQVTVAFNHFGQGLIQRMPRCRWGFFHVLNNDYTHWIMYAIGGSSGPT
ILSQGNRFIAPDDDKAKEVTHRDYAEPPVWGKWQWRSENDVFMNGAKFIQSGKPLGKLPF
NKGYLMKPRHGSQANRLTRFAGTLKCKVGNPC
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaagttcatgcaaggttgcaattgtcctggtcgcttttgccattactattcca
tgccttgagggtggcattggtacgatggacgaatttctcaaagaacgagctatggaggcc
catgaaatcgctctgaaatcctacgtgcctgaccctacaaacgtcacttcccagcacaat
aacttgcatgttaaggagactactaggaagaagccaaagaaggaatcaaacagcacaaca
acaacaaggagggagatgacggaggagaaggataagaagaaatacaaaggaccatgcttg
gccctcaacccaatcgatcgttgttggaggtgcaagaaaagctgggccaaaaaccgtttt
aagttagccagttgcgtcaagggttttggaagaagggccaccggaggatccaagggcaaa
atctacactgtctctgatccctctgacgatgatcccgttgaccctaaagaaggaacccta
cgctacggtgttttacaaaaggacccactctggatcatattttcaaaaagcatgataatc
aagctcaactacgagttgttgatttcttctgacaaaaccatcgacggtcgcggccacacc
gtggtcatcaagggtggtgcaggtcttaccatgcagttcgtgaacaacattatcatccat
gggcttaaaatacaccacatcaagtcgacgccgggtggcatgatcagagactcttgggac
catgtcggaacaagaacaagggctgatggtgatgccatctccattttcggctcttcaaac
atttggatcgatcacatctcactctctgaatgcgaggatggtctcgtcgatattatccag
ggttccactgcaatcaccgtctcaaattgccacatgaccaaacacaacgatgtgatgttg
ttcggagcgagcgacaccttctccggagacaagataatgcaggtgacggtggcattcaac
catttcgggcagggtctgatccagagaatgccccgatgcagatggggtttcttccatgtg
ttgaacaacgattacactcactggataatgtatgccattggtgggagctcagggccaacc
attctgagccaaggaaaccggttcattgcaccggacgacgacaaggcgaaggaagtgacg
cacagggactatgcagaacctcccgtgtgggggaaatggcaatggagatcagagaacgat
gtgttcatgaatggggctaaatttattcagtcagggaaacctctcgggaagcttccattc
aacaaagggtatctcatgaaacctagacatggctctcaagccaacaggctcacacgcttt
gctggaaccctcaaatgcaaagtgggaaacccttgctag
DBGET
integrated database retrieval system
