| Entry |
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| Name |
(RefSeq) SNF2 domain-containing protein CLASSY 4-like
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| KO |
| K10875 | DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-] |
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| Organism |
vun Vigna unguiculata (cowpea)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:vun00001]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114184841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:vun03400]
114184841
DNA repair and recombination proteins [BR:vun03400]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
114184841
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
5:20579489..20583964
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| AA seq |
1208 aa
MNPGTAIACRTRYRRRKLFEDALIMSRKKKKARERESISSKGEDGSGKMEPVSPFSVGLS
MNSERVSSESGFQPLGGHENDPIEISDGDNGSETEEGLRESENDIFCVEVEKKSEEDEGS
FVLGDKVVNFDDDNCGCVSDKPDVLTIDDDEEDDLLSSSTDSEDKETSDEDFLVADDDDG
FETEGSTTSDESNGDDGRGGDDVRGVQRKILKGMVRKMESDAESSEIRERKGERKGNEQV
DVEELWRMADCTSATSSKSEIYKKEGQHVAHKDEEKRVQSVIADSEVFGVHVKNSGCSMS
SEALEHMKKSDSATLQKQIGDPAVVEKSGRNKNINVDLVDIDDIKRKGNQQNKGTGLRSV
SFRPKNQAKIGDSAKIVMEKDKEGEPKYWFHSNNRKKDGDGAVDDETGDKELYEVTRMPS
TLKNKCYQIFTECFMGKNDSVKDNSYKLDEKDDVVAEGETQALVSREPTPLNCSFMNEEE
PVEKSEEDELDMLWAEMDMLLRAEEIGTQVNNMGTNEATENGESSAPKCKHDTIFNEQIG
IYCRWCGWTVTEIKYITPPFVDSERYGGRMASSSEGKTSLLDGAMLNESGDDDSEVIWSQ
KEGTVWDLIPDIKQSLYPHQQEGFEFIWRNLAGTIDLAKLKSVDPCNEGGCIISHAPGTG
KTRLTMVFLQSYLQLFPKCLPVIIAPSSILLTWEDELRKWKLGIPFHNLNSAELSGNEQL
ISEVDWYGNQRQNKDAIRMVKLCSWYKEKSILLISYNLYEKLAGATSVGGGGKDKNNKKF
GKKKRAKTREYIESGMGKVLRDYPGLLVLDEGHTPRNQNSYIWKVLSESRTQKRILLSGT
PFQNNFLELYNILCLMKPSFPDSIPQELKKFCQSRLMQGGKASKEMNWEHVSSGNPADVK
INQLKLLMNPFVHVHKGSILEKNLPGLRECVLVLKPDILQQETLESIECSQNVLNFEHKL
ALVSVHPSLFLSCSLSEKEESIIDKDRLEKIRLNPYAGVKTKFLIEFIRLCDAVNEKVLV
FSQFIDTLDLIKEQLESALNWTVGMEVLYMYGRLDQKQKQSLIYSFNDANSRAKVLLASI
KASSEGINLVGASRVVLLDVVWNPSVERQAICRAYRLGQKKVVFTYHLLAQDTPECTKYC
KQAEKNRLSELVFSNKNAESDKLKSSGVMLEDFEDRVLDVMVQHEKLKDMIGECLIQPRK
RDLEILGP |
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| NT seq |
3627 nt +upstreamnt +downstreamnt
atgaatccagggactgccattgcttgcaggacgcgttacaggaggagaaagttgtttgag
gatgctttaataatgagtcggaagaagaagaaggcacgggaacgtgaatcaatctcctcc
aagggtgaagatggaagtgggaaaatggaacctgtgtcaccattttctgttggtctttca
atgaacagtgaaagagtatcatccgaaagtggatttcagcctttgggaggacatgagaac
gacccaattgaaatcagtgatggtgacaatggcagtgagactgaagaggggttgagggag
tctgagaacgatatattttgtgttgaagtagaaaagaagagcgaagaagatgaagggtct
tttgtgttgggtgataaagttgtgaactttgacgatgataactgtggttgtgtatctgac
aagccggatgtattgactattgatgatgacgaggaggatgatctgctttcgtcttcaact
gatagtgaggataaggagacgagcgatgaagattttctggttgctgatgatgatgatggc
tttgagactgaaggctcgacgaccagtgacgagagtaatggtgatgatggtcgtggtggt
gatgatgtgaggggagttcagaggaagatattgaagggtatggtgagaaagatggagagt
gatgctgaaagcagtgagattcgtgaaagaaaaggtgaaagaaaaggtaatgaacaggta
gatgtggaggaactatggaggatggctgattgtactagtgcgacctctagtaaatctgag
atttataagaaggaaggacaacatgtagcacataaagatgaagaaaagagagtgcaaagt
gtcattgcagattctgaagtttttggtgttcacgtgaaaaattcaggttgttctatgtct
tctgaagcactggagcatatgaagaaaagtgatagtgcgacattgcagaaacagatagga
gatccagctgtggtcgagaagagtgggagaaataaaaatatcaatgttgacttggtagat
attgatgatattaaaagaaaagggaatcaacaaaacaaaggaacaggtttgagaagtgtt
tcttttcgtcccaaaaaccaagcgaagataggagattcggctaaaattgtaatggaaaag
gacaaggaaggggaaccaaaatattggtttcatagcaataaccgtaagaaggacggggac
ggagcagtggatgatgaaactggtgacaaagagttgtatgaagtaacaaggatgccatcc
acgttgaaaaacaaatgttatcaaatttttactgaatgttttatgggcaagaatgattct
gttaaggataattcatataagttggatgaaaaggatgatgttgttgctgagggtgagact
caggcattagtttccagggagccaacccctttgaattgttcttttatgaacgaagaagaa
cctgttgaaaaatcagaggaagatgagttagatatgttgtgggctgaaatggacatgttg
cttcgagctgaagaaattgggacccaggttaataatatggggacaaatgaagcaacagaa
aacggagaaagttcagccccgaagtgcaagcatgacaccatctttaatgagcagattggg
atatattgtagatggtgtggttggaccgtcactgaaatcaaatatatcacaccaccattt
gtggattctgaaagatatggtggtagaatggcgtcatctagtgaagggaaaacctcacta
ttggatggggctatgttgaatgagtctggtgatgatgactcggaggtcatttggtctcag
aaagaaggcacagtttgggaccttattcctgacatcaaacagagcttgtatcctcatcaa
caagaagggtttgagtttatttggagaaacttggcaggaactattgaccttgccaaattg
aagagtgttgacccttgcaatgaaggaggctgcattatttctcatgctcctggaacagga
aagactaggttgaccatggtgtttcttcagtcatatttgcaattgtttccaaagtgtcta
cctgttatcattgctccttccagcatattgcttacctgggaagacgagctgagaaagtgg
aaactaggaattccattccataacttgaacagtgctgaattatcagggaacgaacaactc
atcagtgaagttgattggtatggtaaccagaggcagaataaggatgccataaggatggtg
aaattgtgttcatggtacaaagaaaagagcattctactaatcagctacaatttgtatgag
aagctagcaggggccacttctgtaggtggtgggggaaaagataagaataataaaaagttc
gggaaaaagaaacgtgcaaagacaagggagtacattgaaagtggaatgggaaaggttctg
cgtgactatcctggtttgctagtacttgacgaaggacacactcctcggaaccagaatagt
tatatttggaaggttctttctgaaagtagaactcagaagagaattcttctctcagggact
cctttccagaacaactttttggaactttacaatattttgtgcttgatgaaaccatccttt
cctgacagcatcccacaagaactcaagaagttttgccaaagtagactaatgcaaggagga
aaagcttcgaaagaaatgaattgggaacatgtttcttctggaaatccagctgatgtaaaa
ataaaccagctaaaattgctgatgaacccctttgttcatgttcacaaaggtagcattctt
gagaagaaccttcctgggttgagagaatgtgtgttggttctgaagccagacattttgcag
caagaaactctagagagcattgaatgctctcaaaacgtactaaactttgaacacaagttg
gccttggtctcagtccatccatcccttttcctcagctgctccttgtcagaaaaagaagaa
tctattattgacaaggataggttggaaaaaattagactgaacccttatgcaggggtgaaa
accaagtttctgatcgagtttataagactatgcgatgcagttaatgagaaagtccttgtt
ttcagccaattcattgatactttagacttaatcaaggagcagctggagtctgcattgaat
tggactgtggggatggaagtgttatatatgtatggcaggcttgaccaaaagcagaaacag
tccctcatttatagtttcaatgatgcaaatagccgagcaaaggtgttacttgcttctata
aaagcatcctctgaaggcattaacttagttggagcttcaagggtggtgcttcttgatgtt
gtttggaatccctcggtggaaaggcaagctatttgccgagcatatagacttggacagaag
aaagttgtttttacttatcatcttcttgcccaggacacccctgaatgcaccaaatattgc
aaacaagctgaaaagaaccgattatctgaactggttttctcaaataaaaatgctgaaagc
gataagctcaagagtagtggagtaatgcttgaggattttgaggatagagttcttgatgtc
atggttcagcatgaaaaactcaaggatatgattggtgaatgtctaattcaacctaggaag
agagatttggagatcttgggtccctga |
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