KEGG   Vigna unguiculata (cowpea): 114184878
Entry
114184878         CDS       T06017                                 
Name
(RefSeq) THO complex subunit 4A
  KO
K12881  THO complex subunit 4
Organism
vun  Vigna unguiculata (cowpea)
Pathway
vun03013  Nucleocytoplasmic transport
vun03015  mRNA surveillance pathway
vun03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vun00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114184878
  09122 Translation
   03013 Nucleocytoplasmic transport
    114184878
   03015 mRNA surveillance pathway
    114184878
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vun03019]
    114184878
   03041 Spliceosome [BR:vun03041]
    114184878
Messenger RNA biogenesis [BR:vun03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     114184878
    TREX complex
     114184878
Spliceosome [BR:vun03041]
 Complex C
  Other components
   EJC/TREX
    114184878
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    114184878
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3 Btz
Other DBs
NCBI-GeneID: 114184878
NCBI-ProteinID: XP_027928056
LinkDB
Position
5:45056642..45058895
AA seq 245 aa
MSAALDMTLDDIIKNNKKSASANSRGRGRASGPGPARRLPNRAANRAAPYATAKAPESAW
QHDMYADQPAATAFAGQGGRASSIETGTKLYISNLDYGVSNDDIKELFLEVGDLKRHTVH
YDRSGRSKGTAEVVFSRRADAVAAVKRYHNVQLDGKPMKVEIVGTNIATHAAAPTVNGTF
GNSGGPPRSVQGRNGPLGRPRGAPRGRGGSRRGGRGRGRGRDEKVSAEDLDAELEKYHAE
AMQLN
NT seq 738 nt   +upstreamnt  +downstreamnt
atgtctgcggctctggatatgacgctcgacgatattatcaagaacaacaagaagtcagcc
tccgccaactccaggggccgaggccgagcttcgggacccggacccgctcgtcgtctcccc
aaccgggccgcaaatcgtgccgcgccgtacgccaccgctaaggcgccggagtctgcgtgg
cagcacgatatgtacgccgatcagccagccgccacggcttttgcaggtcaaggtggtcgg
gcgtcttccatcgaaacagggacgaagctttacatatctaatctggattatggcgtctcc
aatgacgatattaaggagttatttcttgaagttggtgacctgaagcggcatactgttcac
tacgacaggagtggaagatccaagggtacagcggaagtagtcttctctcgacgtgctgat
gctgtagctgcagtgaagaggtatcacaatgttcagctagacgggaaaccaatgaaggta
gagattgtggggacaaatatcgccacacatgctgcagcgcccactgttaatgggactttt
ggaaattctggtggtcctcccagaagtgtacaagggagaaatgggccactaggaaggcca
cgtggtgcgcctagagggcgaggtggcagtcggaggggtggtcgaggacgtggtagaggt
cgtgatgaaaaggtatctgcggaagaccttgatgctgagttggagaagtatcatgctgag
gctatgcaattgaactga

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