Vigna unguiculata (cowpea): 114184878
Help
Entry
114184878 CDS
T06017
Name
(RefSeq) THO complex subunit 4A
KO
K12881
THO complex subunit 4
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03013
Nucleocytoplasmic transport
vun03015
mRNA surveillance pathway
vun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114184878
09122 Translation
03013 Nucleocytoplasmic transport
114184878
03015 mRNA surveillance pathway
114184878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vun03019
]
114184878
03041 Spliceosome [BR:
vun03041
]
114184878
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114184878
TREX complex
114184878
Spliceosome [BR:
vun03041
]
Complex C
Other components
EJC/TREX
114184878
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
114184878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
Btz
Motif
Other DBs
NCBI-GeneID:
114184878
NCBI-ProteinID:
XP_027928056
LinkDB
All DBs
Position
5:45056642..45058895
Genome browser
AA seq
245 aa
AA seq
DB search
MSAALDMTLDDIIKNNKKSASANSRGRGRASGPGPARRLPNRAANRAAPYATAKAPESAW
QHDMYADQPAATAFAGQGGRASSIETGTKLYISNLDYGVSNDDIKELFLEVGDLKRHTVH
YDRSGRSKGTAEVVFSRRADAVAAVKRYHNVQLDGKPMKVEIVGTNIATHAAAPTVNGTF
GNSGGPPRSVQGRNGPLGRPRGAPRGRGGSRRGGRGRGRGRDEKVSAEDLDAELEKYHAE
AMQLN
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggctctggatatgacgctcgacgatattatcaagaacaacaagaagtcagcc
tccgccaactccaggggccgaggccgagcttcgggacccggacccgctcgtcgtctcccc
aaccgggccgcaaatcgtgccgcgccgtacgccaccgctaaggcgccggagtctgcgtgg
cagcacgatatgtacgccgatcagccagccgccacggcttttgcaggtcaaggtggtcgg
gcgtcttccatcgaaacagggacgaagctttacatatctaatctggattatggcgtctcc
aatgacgatattaaggagttatttcttgaagttggtgacctgaagcggcatactgttcac
tacgacaggagtggaagatccaagggtacagcggaagtagtcttctctcgacgtgctgat
gctgtagctgcagtgaagaggtatcacaatgttcagctagacgggaaaccaatgaaggta
gagattgtggggacaaatatcgccacacatgctgcagcgcccactgttaatgggactttt
ggaaattctggtggtcctcccagaagtgtacaagggagaaatgggccactaggaaggcca
cgtggtgcgcctagagggcgaggtggcagtcggaggggtggtcgaggacgtggtagaggt
cgtgatgaaaaggtatctgcggaagaccttgatgctgagttggagaagtatcatgctgag
gctatgcaattgaactga
DBGET
integrated database retrieval system