Vigna unguiculata (cowpea): 114184971
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Entry
114184971 CDS
T06017
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03013
Nucleocytoplasmic transport
vun03015
mRNA surveillance pathway
vun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114184971
09122 Translation
03013 Nucleocytoplasmic transport
114184971
03015 mRNA surveillance pathway
114184971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vun03019
]
114184971
03041 Spliceosome [BR:
vun03041
]
114184971
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
114184971
Spliceosome [BR:
vun03041
]
Common components
Common spliceosomal components
Cap binding complex
114184971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
114184971
NCBI-ProteinID:
XP_027928219
LinkDB
All DBs
Position
1:complement(21945414..21964239)
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AA seq
859 aa
AA seq
DB search
MSSWKNLLLRIGDKSPEYGVSSDHKDHIDTCFGALRRELDHSQTDVLEFLLTCAEHLPHK
IPLYGTLIGLINLENEDFGKQLVEKTKTMFQDALDTGNCNGVRVLMRLLTVMMCSKVLQP
SSLVAVFETFLSSAATTVDEEKGNPLWQPCADFYITCILSCLPWGGAELTEQVPEDIDRV
MVAVESYLSIRKHTTDTGLSFFENDDENGEGLNDKDFLEDLWDRIQVLSLNGWKVESVPR
PHLSFEAQLVAGKSHEFGPISCPSLPKPPSVPSGVSTGKQKHEAELKYPQRIHRLNIFPP
SKHEDIQPIDRFVMEEYLLDVLLFFNGCRKECASFMVGLPVSFRYEYLMAETIFSQLLML
PQPPFRPVYYTLVIIDLCKALPGAFPAVVAGAVRTLFERIADLDMECRTRLILWFSHHLS
NFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPRLEELLPPK
SGPNFSFGSEDGKESNEHALSGKLNSMVKGKSPVREIISWIDESVFPNNGLEVTLRVIVQ
TLLNIGSKSFTHLITVLERYAQVFVKVCPDEDRQVMLIAEVSSFWKSNTQMTAIAIDRMM
GYRLVSNLAIVRWVFSAENIEQFHTSDRPWEILRNAVSKTHNRISDLRKEILTIKKNISS
AEEAAMEAKAELYAAESKLTLVDGEPVLGDNPVRLNRLKSHAEKTKEDVVTLTESLQSKE
ALLARAIEENEALFILLYKSFSNVLTERLPEGTRTLHELKSAQVDVMAVDAEEPPSMELD
DENQRSQNSQSNGEKKGVVGEKEQWCITTLGYVKAFSRQYAAEIWPYVEKLDAEVLTEET
PYLFRAAVYTGLRRPIHEA
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttggaaaaaccttcttctacgaatcggtgacaagagtcccgaatacggagtc
tcttctgaccataaagatcacattgatacgtgctttggcgcccttcgtcgcgaacttgac
cactcccaaaccgatgttttggagttccttctgacgtgtgctgagcatttgcctcacaag
attcctctgtatggaaccctgattggcttgattaacttggaaaatgaggactttggaaag
caactagtggagaaaactaaaaccatgtttcaggatgccttggatactggaaactgcaat
ggggttcgtgttctaatgcggcttttgactgttatgatgtgcagtaaggttcttcaaccc
agctccttggtggctgtctttgaaacatttttatcatcagctgccacaacagtagatgag
gaaaaaggcaatcccttatggcagccttgtgcagacttttacataacttgcattttgtca
tgcctcccatggggcggagcagaacttactgagcaagttcctgaagatattgatagagtg
atggttgctgtagaatcttacttgagcatcagaaagcatacaactgatactggcttatcc
ttttttgagaatgatgatgaaaatggggaaggtcttaatgacaaggatttcttagaagat
ttatgggataggatacaggttttatcactgaatggatggaaagttgaaagtgttccaaga
cctcatctttcatttgaagctcagctggttgctgggaagtctcatgaatttgggccaata
agctgccccagcctaccaaaaccaccttcagttccttctggcgtgtctactggtaaacag
aagcatgaagcagaattaaaatatcctcaaaggatacaccggttaaacatatttcctccc
agcaaacatgaggatatacaacctatagacagatttgttatggaagagtatctccttgat
gtgcttcttttcttcaatggctgtcgaaaggagtgtgcatctttcatggttggtttgcca
gtttccttcagatatgagtacctcatggccgagacaatattctctcagctgctgatgcta
cctcaaccacctttcagaccagtatattacacacttgtaattattgacctttgcaaggct
cttcctggagcttttccagctgttgttgctggagcagttcgtactctctttgagaggata
gctgatttggatatggaatgtcgaacacgtctaatcctttggttctcacaccatttatca
aacttccagttcatctggccatgggaagagtgggcttatgtcctagacctcccaaagtgg
gctccacaacgtgtctttgtccaagaagttttggagagggaagttcgcttgtcatactgg
gacaaagttaagcagagtattgaaaatgcacctcgtttggaagaattgcttcctccaaaa
agcgggccaaattttagttttggttcagaagatggtaaggaaagcaatgagcatgcattg
tctggaaagctcaacagcatggttaaagggaagtcacctgtccgtgaaataatctcttgg
attgatgaaagtgtgtttccaaataatggtctagaagttacactcagagtgattgtacaa
actcttctcaatattggatccaagagtttcactcatttgataactgtcttggagagatat
gcgcaagtctttgtgaaagtatgtccagatgaggatcgacaagtcatgcttatagctgaa
gtgagttctttctggaagagtaacacccaaatgacagcaatagctattgacaggatgatg
ggttatcgactcgtttcaaatctggctattgtgagatgggtcttctcagcagaaaatatt
gagcaatttcatacatcggatcgtccatgggagattcttagaaatgcagtaagcaagaca
cataatcgtatttctgatctacggaaagaaatattaactattaaaaagaacatttcatca
gccgaagaagctgccatggaggcaaaagctgagctatatgctgcagagtcaaaacttaca
ctcgtggatggtgaaccagttcttggtgacaaccctgttagattgaatagattgaaatca
catgctgaaaagacaaaggaggacgtggtgactcttacagaatctttacaatctaaggaa
gctcttcttgcccgagcaattgaggaaaatgaggcattatttatcttgttgtacaaaagc
ttctcaaatgtgttgaccgagcggcttcctgaaggaactagaacactgcatgagttgaag
tctgcgcaagtagatgtgatggcagtggacgctgaagagccaccatcaatggaattagat
gacgaaaaccagagatctcaaaacagtcagtcaaatggagagaagaaaggtgttgtaggt
gaaaaggagcagtggtgtatcaccactttaggctatgtgaaggctttttctaggcagtat
gctgctgagatatggccctatgttgaaaagttggatgcagaggtattgacagaagaaaca
ccttatctttttagggcagctgtttataccggtcttcgaagaccaattcatgaggcatga
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