Vigna unguiculata (cowpea): 114185002
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Entry
114185002 CDS
T06017
Name
(RefSeq) RAB6A-GEF complex partner protein 1-like isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vun04131
]
114185002
Membrane trafficking [BR:
vun04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
114185002
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RSE1_2nd
Beta-prop_HPS5
WD40_Prp19
Motif
Other DBs
NCBI-GeneID:
114185002
NCBI-ProteinID:
XP_027928268
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Position
5:complement(5365109..5376863)
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AA seq
1123 aa
AA seq
DB search
MYMAYGWPQVIPLEQGLSPSAQKIVYLKVINRTLLVVSPTHFELWSTSQHRVRLGKYKRD
SDSLQREGENMQAVWSPDAKLIAILTSTFFLHIFKVQFSDKRIHTGGRQPSALCLAIISL
LLTEQVPFAVKDLSVSNIISDNKHMLLGLSDGTLYSISWKGEFFGASEFDPQPTNSFDYS
QMPLTIENGLSPKSHPKALMFNHVIPRKSEINQLELCLPLRLLFVLYSDGQLVSCSVSKK
GLKQVDCIKAEKKLSGGDAVCVSVALEQQILAVGTKRGTVELYDLAESVSLIRAVSLYDW
GYSMDDTGPVSCIAWTPDNSAFAVGWKLRGLTVWSVSGCRLMSTVRQIGLSSMSSPTSKQ
NHDCKYEPLMGGTSLMQWDEYGYRIYAIEEGCSGRILSFSFGKCCLSRGVSGTTYIRQVI
YGEDRLLIVQSEETDELKMLHLKLPVSYISQNWPVQHVAASQDGMYLAIAGLHGLILYDI
RLKRWRVFGDVTQEQKIQCKGLLWLGKIVVVCNYIDSSNTYELLFYPRYHLDQSSLLCRK
PLLAKPMVMDVYQDHMLLTYRPFDVHIFRVKLFGELSPSGNPDLQLSAVRELSIVTAKSH
PAAMRFIPDQHPRESISNNYSSVSSDSLTREPARCLILRANGELSLLDLDDGRERNLTDS
VELFWVTCGQSEDKTNLIEEVSWLDYGHRGMQVWYPSPGADPFKQEDFLQLDPELEFDRE
VYPLGLLPNAGVVVGVSQRISFSASAEFPCFEPSPQAQTILHCLLRHLLQRDKIEEALRL
AELSAEKPHFSHCLEWLLFTVFEADISRPNVSRNQISVVKHAKSSLLEKTCDLIRNFPEY
LDVVVSVARKTDGRHWADLFAAAGRSTELFEECFQRRWYRTAACYILVIAKLEGPAVSQY
CALRLLQATLDESLYELAGELVRFLLRSGREYDQASIDSDKLSPKFLGYFLFRSIERKQS
SDKSSSFKEQSAHVTSVKNILENHASYLMAGKELSKLVAFVKGTQFGLVEYLQREKEGSA
RLENFASGLELISQKFQMGTLQSRLDADFLLAHMCSVKFKEWIVVLATLLRRSEVLFDLF
RHDVRLWKTYSTTMESHPAFTEYQDLLADLEQRLSSVSNVERK
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgtatatggcatatgggtggccccaggtcatccctctcgagcaaggactgtctccatct
gcacagaagattgtgtacctcaaagtcatcaatcgcacgttgctcgttgtgtcccccact
cactttgaactttggagcacttcccagcatagagtgagattggggaagtacaagagagat
tcagattcattgcagagggaaggagaaaacatgcaggccgtgtggagccctgatgccaaa
ttaattgctattcttacatctaccttctttcttcatattttcaaagtccagttctcagat
aaaagaatacacacgggtggtagacaaccctctgctttgtgcctagctatcatttctctt
ctgctcacagagcaagttccttttgcagtaaaggatttatctgtgagcaatattatcagc
gataacaaacatatgttacttggactttctgatggaactttatacagtatatcttggaaa
ggggagttctttggggcttctgaatttgatccacaacccactaatagctttgactattct
caaatgccacttacaatagagaatggcctttctcctaaatctcacccgaaggctcttatg
ttcaatcacgttattcctagaaagtctgaaatcaatcaactggaactttgccttccattg
aggttgctatttgtcttgtattctgacgggcaacttgtctcatgttctgtgagtaaaaaa
ggcctaaagcaagttgactgtatcaaagcagaaaagaagttgtctggtggtgatgctgtc
tgtgtctcagtagctctagagcagcaaattcttgctgttggtactaaaagaggaacagtg
gagttgtatgatttggcagaatcagtatcacttatacgtgcagtctctttgtatgactgg
ggatattcaatggatgacactggtcctgttagttgcattgcttggacacctgataattcc
gcttttgcagtcgggtggaagttaagggggcttacagtttggtccgtttctggttgtcgc
ttgatgtcaactgtacgacaaataggcttaagttccatgtcttctccaacttctaaacaa
aaccatgattgtaagtatgaaccattgatgggtggtacctcactgatgcagtgggatgaa
tatggatatagaatttatgctattgaggaggggtgttcggggagaattctatcattctca
tttgggaaatgctgtcttagcagaggtgtttcaggcactacatatatccgtcaagtgatt
tatggagaagaccgtttactcattgtgcagtcagaagagactgatgaacttaaaatgcta
catcttaagcttccagtttcttatatttcacaaaactggccagttcaacatgtggcagct
agccaggatgggatgtacttagctattgctggtcttcatggtttgatattgtatgatata
cgactgaaaagatggagagtatttggagatgttacacaagagcaaaagattcagtgtaaa
ggcttgttatggttggggaagattgttgttgtctgcaactatattgattcatccaacacc
tatgaattgctcttttacccgagatatcaccttgaccaaagttcattactctgtcggaaa
ccattgcttgctaaaccaatggtgatggatgtgtaccaagatcatatgcttcttacttat
agaccatttgatgtccacatattccgtgtgaaattatttggtgaattatctccttcagga
aatccagatttacagctttctgcagtacgagaactttcaattgttactgccaagagccat
cctgctgcaatgcgattcattcctgatcaacatccaagagaatctatttcaaacaattac
agttcagtttcatcagattcattaacaagagagccagcaagatgtttgatattgagggca
aatggggagctttcacttcttgatcttgacgatggacgggagagaaatcttactgattcg
gttgaactattttgggtcacctgtggtcagtctgaggataaaacaaatttgattgaggaa
gtttcatggttagattacggtcaccgtggaatgcaggtttggtatccatctccaggtgct
gatccttttaagcaggaagatttcttacagctggacccagagcttgagtttgatcgtgaa
gtttaccctttgggacttcttccaaacgctggtgtagttgttggtgtttcccagagaatt
tcattttcagcaagtgctgaatttccatgttttgaaccatctcctcaagcacaaacaata
ctacactgcttactacgccatcttcttcagagggacaaaattgaggaagctttaaggctg
gcagagctatcagccgagaagcctcatttttcacattgtctagagtggctcctttttaca
gtatttgaagcagatatatccaggccaaatgtgagcaggaaccagatctcagttgttaaa
catgctaaaagctctcttttagagaagacctgtgacctgatcaggaattttccagagtac
cttgatgttgttgtaagtgttgcaagaaaaacagatggtcgtcattgggcagatttgttt
gctgctgctggaagatcaactgaattgtttgaggaatgctttcaacgtagatggtaccgc
actgcagcatgttatatacttgtcatcgccaaactggaaggtcctgctgtcagtcagtac
tgtgctttacggttattacaggcaacacttgatgaatcattgtatgagcttgctggggag
ctggtgcggttcttgctgagatctggtcgggagtatgaccaagcatcaattgattcagat
aaactgtctccaaaatttttaggctattttctttttcgttctattgagaggaagcaatca
tcagataaaagctcctcattcaaagaacaaagtgcccatgttacctctgtcaagaatatt
ttagaaaatcatgctagttacctgatggctgggaaagagctctccaagcttgttgcattt
gtaaaaggcactcaatttggtttagtggagtatctacaacgcgaaaaagaagggagtgca
cggttggagaattttgcttctgggcttgaactaataagccaaaagtttcaaatgggaaca
ttacagagccgcttggatgctgattttctcctggcacatatgtgctctgtgaagtttaag
gaatggatagttgtcctggctactctcttaagacgttctgaggttctttttgacttgttc
agacatgatgttcggttgtggaaaacgtacagcaccactatggagtcacacccagcattt
acagaatatcaagatttgctggcagacctggaacagagactttcatcagtttcaaatgta
gaaagaaagtaa
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