Vigna unguiculata (cowpea): 114185114
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Entry
114185114 CDS
T06017
Name
(RefSeq) nuclear pore complex protein NUP93A-like
KO
K14309
nuclear pore complex protein Nup93
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114185114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vun03019
]
114185114
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114185114
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
TPR_12
TPR_7
TPR_2
PrmA
DUF4618
Motif
Other DBs
NCBI-GeneID:
114185114
NCBI-ProteinID:
XP_027928441
LinkDB
All DBs
Position
5:complement(47712856..47721818)
Genome browser
AA seq
861 aa
AA seq
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MANEDLSSWTDLLHSSTKLLEQAAPSAQFPPLQRNLDQLESLSKKLKSKTVRTEAPSQSI
AATRLLAREGINAEQLARDLKSFELKTTFEDVFPVEATSVEEYLQQVHEMAMVSAVQEAQ
KDNLRSFNDYMMKVLEEDWQKEKRDFLQSLSRISTLPRTNIAANSSVGTLPGQIASVSST
PQVSSGSSSMEIVPLTGRPIVEKKASVYAEVVKNLNKARESGLPFKPAAAFKGAYENLGI
DTSSGKSVTMRKIWHLVQMLMGEDSAPQRVSKRMSLIIGARRHLEWGHEKYIMDTIQSHP
AQAALGGGVGNLQRIRAFLRIRLRDYGVLDFDASDARRQPPVDTTWQQIYFCLRSGYYDE
ARNIALSSRASHQFAPLLTEWINTGGMVPKETASTASEECEKMLRTGDRVGRTAYDKKKL
LLYAIISGSRRHIDRLLRDQPTLFSTIEDFLWFKLSAVRDCPSGPSSLVLSDGLIPYSLD
DLQSYLNKFEPSYYTKNGKDPLVYTYILLLSIQLLPAVLYLSKEAGDEGYNIDAVHLSIV
LADHGVLSEGAGSGQKLGMMDAYAEVSTIIRQYGSMYLRLGDLQMALEFYAQAAAAVGGG
QLSWTGRGNVDQQRQRNLMLKQLLTELLLRDGGIYLLLGARGSGEEGELGRFVTDPKARQ
QFLIEAACQCQEAGMYDKSIEIQKRVGSFSMALDTINKCLSEAISALFRGRLDGESRTAG
LIHSGNEILETYTYYPDVSLQEREHVFEQQTVLRQLESILSIHKLARLGHYVDALREVAK
LPFLPLDPRSPDSAVDAFENLSSHVQACIPDLLKVALTCLDNVTDSDGSLRALRAKIATF
IANNLKRNWPRDLYERVAQRL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaagacttgagtagttggactgatcttctgcattcttcaacgaagcttcta
gaacaagctgctccttctgctcagttccctccacttcagaggaacttagatcaactagaa
tcattatccaagaagcttaaatccaagacggtaaggactgaggcaccatctcaatctatt
gctgcaacaaggctccttgctcgtgaggggataaatgcagagcaacttgcaagggatctg
aagtcatttgaactgaagacaacttttgaggatgtttttcctgttgaggcaacaagtgtt
gaagagtatctgcagcaggttcatgaaatggcaatggtctctgccgtacaggaagctcaa
aaggataatctcaggagtttcaatgattacatgatgaaagttttagaggaggattggcaa
aaagaaaagcgtgatttccttcagagtttaagtcgaatttcaacattacctaggacaaac
attgctgctaacagcagtgtgggtaccctcccaggtcaaattgcatccgtgtcttctact
ccacaagtctcatctggtagttcaagtatggagattgttcctctgactggcagacctatt
gtggagaaaaaggcatctgtgtatgctgaggtagtgaagaatctgaataaagcaagggag
tcagggttaccatttaaacctgcagcagctttcaagggtgcatatgaaaatttaggcatt
gatactagtagtggaaaatcagtaacgatgcgaaagatatggcaccttgttcagatgctg
atgggtgaggactcagccccacaacgtgtttcaaaacggatgtcattgattattggtgca
agacgccaccttgaatggggacatgaaaaatacataatggacaccatacaaagccatcct
gcacaagctgctcttggtggtggtgttgggaatttgcaaagaattcgtgcctttcttcgg
attcggttgagggattatggagtactggattttgatgccagtgatgctcggaggcagcct
cctgttgataccacatggcagcagatatatttttgcctgaggtctggttattatgatgaa
gcaagaaatattgccctatcttcacgtgcttcacatcaatttgctcctttgctcacagag
tggattaatactggagggatggtcccaaaagagactgcaagtactgcatcagaggaatgt
gaaaaaatgttgagaaccggtgaccgggttggtcgaactgcatatgacaagaaaaaatta
cttttgtatgccatcatatcagggtcccgaagacatattgatcgcctgcttagagatcag
ccaactctctttagtacaatagaagatttcttgtggttcaaattgtcagcagtgcgggat
tgtcctagtggaccttcatcccttgttctaagcgatggtctgattccgtacagcctggac
gatttgcagagttacctgaataaatttgagccctcatactatacaaaaaatggaaaagat
cctctagtatatacctatatcttgcttttaagcattcagttgcttccagctgtattatac
ttgtctaaggaagcaggagatgaagggtataacattgatgctgtacacctatcaattgtg
ctagctgatcatggggtcctttctgaaggtgctggttctgggcaaaagttgggaatgatg
gatgcttatgcagaagtatccaccattatcaggcaatatggatctatgtatttgcgtctt
ggtgatctccaaatggccctggaattttatgcacaagctgctgcagcagttggtgggggg
cagttgtcgtggacaggtagaggtaatgttgatcagcagaggcagagaaatctgatgctg
aagcagcttctcactgaactattattaagggatggaggcatatatcttttacttggtgca
agaggttcaggagaagaaggtgaattgggacgttttgtgacagatccgaaagccaggcaa
caatttttaattgaagctgcatgccagtgtcaggaggctgggatgtatgacaaatcaata
gaaattcagaagagagttggttccttctcaatggctctagataccatcaacaaatgcctt
tctgaagctattagtgcccttttccgtggaagattagatggtgaaagccggactgctggc
ctcattcattctggcaatgagattttggagacatatacttattatccagatgtcagtctt
caagagagagaacacgtttttgagcagcaaactgtgttacgacaacttgagtcaatatta
tcaattcacaaattagcaagactgggacattatgtcgatgcactaagggaggttgctaaa
cttccatttcttcctctagacccccgaagccctgatagtgctgttgacgcgtttgaaaat
ttatcttcacatgtccaagcttgtattccagatcttttgaaagttgccctcacttgtctg
gacaatgtgacagactctgatggatcacttcgtgccttaagggctaagattgcgactttc
attgcaaataatttaaagaggaactggccgcgtgatttgtacgagagagttgcccagagg
ttgtga
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