Vigna unguiculata (cowpea): 114185248
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Entry
114185248 CDS
T06017
Name
(RefSeq) ubiquitin receptor RAD23b-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03420
Nucleotide excision repair
vun04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114185248
09124 Replication and repair
03420 Nucleotide excision repair
114185248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
vun03051
]
114185248
03400 DNA repair and recombination proteins [BR:
vun03400
]
114185248
Proteasome [BR:
vun03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
114185248
DNA repair and recombination proteins [BR:
vun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
114185248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
CUE
TECR_N
UBA_RAD5A
Ubiquitin_2
UBA_3
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
114185248
NCBI-ProteinID:
XP_027928669
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Position
5:complement(48481125..48488567)
Genome browser
AA seq
367 aa
AA seq
DB search
MKLTVKTLKGSHFEIRVQPSDTIMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA
DNKVSEDGFLVVMLSKSKTLGSAGTSSSQPASNPPITVSTPNSSSLVQTQSANNNAPATD
VTTTNVTTDTYGQAASNLVAGSNLEQTIQQIMDMGGGSWDRDTVSRALRAAYNNPERAVD
YLYSGIPEAAEIAVPAAPYPNSQTTETGGVTAGTVPGVPNSSPLNMFPQEAISGVGAGVG
SLDFLRNNPQFQALRSMVQSNPQILQPVLQELGKQNPGLLRVIQEHHAEFLQLINEPIEG
SEGDIFDQPEQDMPHAINVTPAEQEAIGRLEAMGFDRALVIEAFLACDRDEQLAANYLLE
NAGDFEN
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaccgtcaagactttgaaaggcagccatttcgaaatcagggttcagccctca
gatactattatggctgtgaagaaaaatattgaagatgtacaaggcaaagataattaccca
tgtggacagcaattgctgattcacaatggtaaggttttgaaagatgaaactacattagca
gacaataaggtctctgaagatggctttcttgttgtaatgcttagtaagagtaaaaccttg
ggatctgctggaacttcatcaagtcagcctgctagcaacccacctataactgtatcaaca
ccaaattcctcgtctctagtacaaacccaatctgctaacaataatgctcctgcaacagat
gtcacaactacaaatgtgactacggatacttatggccaggctgcttcaaatttagttgct
ggtagtaatcttgagcagactattcagcaaattatggacatgggtggtggcagttgggac
agagatacagttagtcgtgctctacgagcagcttacaataacccagagcgtgctgtggac
tacctgtattctggaattcctgaagcagcagaaattgctgtgccagctgctccttaccca
aatagtcagacaactgaaacaggtggggtcactgcgggaactgttcctggtgtccctaac
tcgtctcccttgaacatgtttccacaggaggcaatttctggtgttggagccggagttggg
tcacttgactttctaagaaacaatccccagtttcaagcattgcgatcaatggtgcaatcc
aatccgcaaattctgcagcctgtacttcaggagcttggaaagcagaatcctggtctctta
agagtaattcaagagcatcatgctgagtttctccagttgattaacgaacctattgagggt
tcagaaggtgatatatttgatcaacctgagcaagacatgcctcatgcaatcaatgtgacg
ccagctgagcaggaggcaattggaaggcttgaagcaatgggatttgatagagccttggtc
atagaggcatttttagcatgtgaccgtgacgagcaattggcagcaaactacttattagaa
aatgctggagattttgagaattaa
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