Vigna unguiculata (cowpea): 114185370
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Entry
114185370 CDS
T06017
Name
(RefSeq) sister chromatid cohesion 1 protein 4
KO
K06670
cohesin complex subunit SCC1
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vun03036
]
114185370
Chromosome and associated proteins [BR:
vun03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
114185370
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GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
114185370
NCBI-ProteinID:
XP_027928860
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Position
5:4540194..4553556
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AA seq
1268 aa
AA seq
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MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEVPIALRLSSHLL
LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
LPDSDILQANYVDHHVSTREQITLQDTMDGVLYSTSQFGLDERFGDGDASQIGLDLDEVL
LNDKATTLEHDDFGASLQMSHQNDEKKEEIDDLPTTGEIREYAEGPSTPGLQEPNLFGTQ
MDQGNNEVDCPNSTDLKSMETTQNELLHHQKDNDVNDCSLQSNGNHISLDLHHEDKGCNL
IEMDEKREEQGHLECQVVIKDQENLMHEDHSLASLPLLDSSNKEFPSTVLPECEGGMINA
SAVHDKKEYLQDGVLMNSDPATAPLDQTVINCAVSSPLTNNENVASDQDNISCKPLSNMD
GSQVPGSGGHLEDGNTLSKHEVLNDIEISKSDRQSCPSDDALVSNLINPLGSPGRPEVVV
DVEAQASRELKEGEGLNHVSLEAVQPTESILQPCTSHLGQPSLSFIEGEKGHVTDVSNPA
LSYQETIEPSVSKETPDFGKTDMEIESQIFSNKVESINRSAVTDMPEPEKLLSLAYQHDG
ETNDLLMASTPDILGATEGHAGPAGVNGISGKKRSFTESTLTVQSMDLMESYGGAQSKRT
AESVPDDDDLLSSILVGRKSSVLKMKPSPAAPEIATMKRARSAPRTTALKRKVLMDDMMV
LHGDTIREQLTNTEDIRRLRKKAPCTSNEILMIQRQFLEDEIFHGSIFTDLTTDFTILRN
ETIDLTGIKVCDYGMDSSFIEKTNDQESYSRTNTEVHGVVGNNEPMAVQYQEDAEVQPPE
IPVLPESHQSEVNLGSHDVDAHRNTTHEPMGVQLQEDAGVHPTDIPVLSESHQSEVNLGS
HDIDAHGHTNIVSHVEELDNSQNVEVDHVGGNIAVSEAENCSAGPGHESSSLTEVLENDF
TTSPTLMDKTNDLVGSIHSDILSIPNAENLNTIPILEDEFVQCQSDRKGVGAIELSMEPG
TEVQTDGFEGNDLYASLATGSKETDGFADIQAPFNGDQPSEENGNSMLGQLNENQIVASA
MECDDKGARSDSIFIENAKVDCLQSEALSVDEKESSLKDEENLVFQEAGLQSTMYPEIRS
PYVEQNDENDMIANDTGFLNVGDDEIIDDDDEDFQPSAEGTHLENSGWSSRTRAVAKYLQ
TVFDKEDLHGRKELHLDNLLVGKTKKEASRMFFETLVLKTRDYVHVEQPKPFANVSIKPR
MKLMRSDF
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgttttattctcagtttattttggccaagaaagggccacttgggactatatggatagct
gcgcatttggagaggaagctccgcaagaatcaggtggctgacactgacattggtgtatcc
gtagattccattcttttccctgaagtaccaattgcactccgtttatccagccatcttttg
cttggtgtggtcaggatatattctaggaaggtgaattacctttttgatgactgtagtgaa
gctttgcttaagataaagcaagcctttcgctccacagcagttgatttgccacctgaagag
tccactgcaccttaccattccatcaccttacctgaaactttcgatcttgatgattttgaa
ctgccagatagtgacattcttcaagctaactatgttgatcaccatgtcagtactagggag
cagattacactgcaagatactatggatggtgtgctttactctacttcacagttcggcttg
gatgagcgctttggtgatggtgatgcttctcaaattgggctagaccttgatgaggttttg
ttaaatgacaaggctactactttggagcatgatgactttggtgctagtcttcaaatgtct
catcaaaatgatgaaaagaaagaggagattgatgatttacccaccactggtgaaatccgt
gagtatgctgagggtccatctacccctggacttcaagagcctaacctatttggaactcag
atggatcagggcaataatgaagttgactgtcctaattcaactgatttaaaatcaatggag
accacacaaaacgaattgttgcatcaccaaaaggataacgatgtaaatgattgctccttg
caaagtaatgggaatcatatttctttagatttgcatcatgaagataaaggctgcaatctg
attgaaatggatgaaaaaagagaggagcaggggcatttagaatgtcaggttgtaatcaag
gatcaagaaaatttgatgcatgaagatcattccttagcatcattacccttgttggactct
tccaataaagagtttccttccaccgtgttaccagaatgtgaaggtgggatgatcaatgcg
tctgctgttcatgacaaaaaggagtacttgcaagatggagttttgatgaatagtgaccca
gcgactgctcctttggaccaaactgttataaattgtgctgtttcttctcctttgaccaac
aatgaaaatgttgcttctgatcaagataacatctcatgtaaaccattgtctaacatggat
ggatctcaggttccaggatcaggtggtcatttggaggacggtaacacattatcaaagcat
gaagttctgaatgacattgaaatttcaaagagtgacagacaatcctgtccatctgatgat
gctctagtatccaatcttattaatccgctaggatcacctggaagacctgaagttgttgtt
gacgtggaagctcaggcttctcgagaactgaaggaaggtgaaggtttaaatcatgtatcg
cttgaggctgtgcagcccactgagtctatccttcaaccatgcacctcccatctgggccag
ccttctctgtcatttattgaaggtgaaaaaggtcatgtaactgatgtttcaaatcctgca
ttaagttaccaagagacaatagagccatccgtatctaaagaaacacctgattttgggaaa
acagatatggaaattgagagtcagatatttagcaataaagtagaaagtataaatagatct
gctgttactgacatgccagagcctgaaaaattgctctccttagcttaccaacatgatggc
gaaacaaatgatttgctgatggcatctactcctgacatcctgggtgcaactgaaggccat
gcgggccctgctggggtaaacggcatttctggtaaaaaacgtagcttcacagaaagtact
cttacagtgcagagtatggatttgatggagtcttacgggggagctcaatccaagagaact
gccgagtctgttcctgatgatgacgatttattgtcatccatattagttggtagaaaatct
tcagttttgaaaatgaaacccagccctgctgcccctgaaatagcaacaatgaagcgagct
cgttctgcacctcgtactactgccttgaagaggaaggtgcttatggatgatatgatggtc
ttgcatggcgatacaatacgtgaacagttgaccaatactgaagacatccgtcgtttacgg
aaaaaagctccttgcactagtaatgagattttaatgattcagagacaatttttggaggat
gaaattttccatggatcgatatttacagatttgactactgactttactattctgcgaaat
gagacaattgatctgactggaatcaaggtttgtgattatggtatggatagttctttcata
gagaaaacaaatgatcaagagtcctactctagaacaaatactgaagttcatggagtggtg
gggaataatgaacctatggcagtccaataccaagaagatgcagaagtgcaacctcctgag
atacctgttttgcctgagagtcatcaatctgaggttaacttgggatctcatgatgttgat
gctcacaggaacacaactcatgaacctatgggtgtccaactccaagaagatgcaggggtg
catcctactgatatacctgtcttgtctgagagtcatcaatctgaggttaacttgggatct
catgatattgatgcccacgggcacacaaatattgtttctcatgtggaggagcttgacaat
tctcaaaatgttgaagtagaccatgtcggaggaaatattgctgtttctgaagcagagaat
tgctctgctggccctgggcatgaatcttcatctttaactgaagtccttgaaaatgatttt
accacatcaccgactctcatggataaaactaatgatctcgttggttctattcattcagat
attttgagcatcccaaatgctgagaatttgaatacaatccctattttagaggatgagttt
gtgcagtgccagagcgatagaaaaggagtaggtgctattgagcttagcatggaaccggga
acagaagttcaaacagatggttttgaaggcaatgatttgtatgcttccttggctactggt
tccaaagaaactgatgggtttgctgatattcaggctccctttaatggtgatcaaccatca
gaggaaaatggaaacagcatgctggggcagttaaatgagaatcaaattgttgcttctgcc
atggagtgtgatgacaagggtgcaaggtctgacagcatatttatagaaaatgctaaagta
gactgtttacaatctgaagctctcagtgtagatgaaaaagagagttctttgaaagatgaa
gaaaacctagtctttcaggaagctggactacaaagtacaatgtaccctgaaattaggagt
ccctatgtagaacagaatgatgaaaatgatatgattgctaatgacacagggtttttgaat
gttggggatgatgagataattgatgatgatgatgaagattttcaaccatctgctgaagga
actcaccttgaaaatagtggatggtcttccaggaccagggctgttgccaagtatctgcag
actgtgtttgataaggaagatcttcatggaaggaaggagctgcatcttgacaatttatta
gttggtaaaacaaagaaggaagcatcacggatgtttttcgagacactggttctcaagaca
agggattatgtccatgtggaacagccaaaaccctttgcaaatgttagcataaaacctcga
atgaagcttatgaggtcagatttctga
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