Vigna unguiculata (cowpea): 114185464
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Entry
114185464 CDS
T06017
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114185464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vun03041
]
114185464
Spliceosome [BR:
vun03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
114185464
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
DUF6139
DAHP_synth_2
Motif
Other DBs
NCBI-GeneID:
114185464
NCBI-ProteinID:
XP_027928999
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All DBs
Position
5:complement(19630816..19641251)
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AA seq
485 aa
AA seq
DB search
MATLADSFLADLDELSDNEAEIPEDNDVDAADMEEDVDGDLADLENLNYDDLDSVSKLQK
TQRYIDIIQKVEEALKMGSDVSTQGVNLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTTGKP
LPEEVLSKTVEACDRALDLDSAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL
ASLAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQTTPPSLRMRACRLLAAK
STLAARVDSIRGDPSGNTGRAFKDEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSKLAA
KVAKRFKEKNYGSSGATSGLTSSLAFTPVQGIELTNPQAHAHQLGSGTQSTYFSETGTFS
KIKRT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggctacacttgctgattcttttcttgccgaccttgatgaactctctgataatgaggct
gaaattccggaggataacgatgttgatgctgctgacatggaagaggatgttgatggtgat
ctggctgacctagaaaacctcaactatgatgacttggacagtgtttccaagttacagaaa
acccagaggtacattgatattatacagaaagtggaagaggcccttaaaatggggtcagat
gtctcgactcagggagtgaatctagaagatgatcctgaatatcaattgattgtggattgc
aatgctctgtcagttgacattgagaatgaaattgttataatccacaattttattcgtgac
aaatatcgattgaaatttcctgagcttgagtcgttggtgcatcacccgatcgattatgca
cgtgtcgttaagaagataggaaatgaaatggatttgactcttgttgatttagaagggctt
ttaccctcagccattataatggttgtgtctgttaccgcttcaactacaactggcaagcct
cttccggaagaagtccttagtaagactgttgaggcctgtgatcgagcacttgatcttgat
tcagcgaagaagaaagttctagattttgttgagagtagaatgggttacattgcacccaat
ctctctgctattgttggcagtgctgttgcagctaaactcatgggcacagctggtggcctg
gcatctctagcaaagatgcctgcttgtaacgttcagcttctaggtgccaagaaaaagaat
cttgctgggttctccacagcaacatctcaatttcgtgtaggttacctcgagcaaacagag
atatttcagactactcctccatctttaaggatgcgagcatgtcgactcctggctgcgaag
tctacacttgcagcacgtgtagattccatacggggggatccatctggaaatactggaagg
gctttcaaggatgagattcacaaaaaaattgagaagtggcaggagcctcctcctgcaaag
caaccaaaaccactaccagttcctgattctgagcctaaaaagaagagaggtggtcgacgg
cttaggaagatgaaggaaaggtatgcaataacagacatgaggaagttagccaataggatg
caatttggagtcccagaagagagttcattaggagatggtctgggtgagggctatggaatg
cttggtcaggctggcagtggcaaactacgtgtgtctgttggtcaaagcaaacttgctgca
aaagttgcaaaaagattcaaggaaaagaattatggtagcagcggtgctacatctggtttg
acatcaagtcttgcattcacaccagttcaggggattgagctgacaaatccacaagctcat
gcacatcaacttggtagcggaactcaaagcacttacttctctgaaacaggaacattttcg
aagattaagaggacttga
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