KEGG   Vigna unguiculata (cowpea): 114185527
Entry
114185527         CDS       T06017                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
vun  Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:vun00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vun03036]
    114185527
   03400 DNA repair and recombination proteins [BR:vun03400]
    114185527
Chromosome and associated proteins [BR:vun03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    114185527
DNA repair and recombination proteins [BR:vun03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     114185527
SSDB
Motif
Pfam: MMS19_N MMS19_C UTP20_N HEAT TOR1L1_N Xpo1
Other DBs
NCBI-GeneID: 114185527
NCBI-ProteinID: XP_027929093
LinkDB
Position
5:46991264..47002816
AA seq 1145 aa
MAETTELTRHIESYVDTSSSSPSLQAASLNAIASLVKTDVLPLQALVRELGMYLTTTDNV
IRARGILLLAEVVTRVESKPLDSATIHSLVGFFKDRLADWRAVRGALVGCLALIRRKSVL
GTVTSSDATAISQSFFQYMQVQSLGQYDRKLCFELLDCLLEHYSDALTTLGDGLIYGVCE
AIDAEKDPECLMLAFHIVQSLAQLYPDSSGLLASFAKDIFDILEPYFPIHFTHPTNGDTH
VQRDDLSRSLMSAFSSTPLFEPFVIPLLLEKLSSSLHSAKIDSLKYLRVCSSKYGAERIA
KYAKSIWFSIKDTLSTYLGEPNFSLNMAPVDGIGGIGFPENEFVMEALSLLQQLIVQNGS
LLTSVIIDDEDVNIIFNTISSYDIYDAIPVQEKKKLHAIGRILYIASKSTITSCNAVFEG
LFSRMIDNLGVSVSNTDSSPNGHIFPSQKVKFGYLYLCIELLAGFRELIVGSDEPALQYV
IDHGTSCTWLHSFSSSLFNDFGSVLAASADRCPLDPDIYIGVKGLQTLAMFHSEVFSLQK
SIFDNILKKFMSIIIEDFNKKVLWEAALKALCHVGSFVQEFHKSEKAMSYGSLVVEKIVE
LLFLDDIVVPFSLKVEALSNIGMTGMKNMVTCLQGMRKAVFANLSKVHTNLRSSEVTVGL
LECYSCKLLPWIYENGGSEDFTVQFAMDIWSQAGNFTVFSTSFEEKGLLDALIKTMKLSV
GSCSVESQNLIIQKAYSILSSRTNFQLKELESLPLSPGKYNISLTDERIISLFASVVIAV
WPKTLIPNMRVLVHLFIVTLLRGIVPVAQALGSILNKLVSTSNSAENSCGITLEEALDAI
FNTKIWFSSIDMLQRCNGTSNGKEIVLTDICLGFANDKLLQINAICGLSWIGKGLLLRGH
EGIKDITMTFIECLIPGTKSALPLVMKSEDQIQDPLVMKSAADAFHVLMSDSEVCLNKKF
HATIRPLYKQRFFSSMMPIFLQLIAKAYSLSSRSFLYRALAHVMSETPMVAVLNDAKKLI
PVLLDCLSMLTEDIQDKDLLYGLLLVLSGILTEKNGQEAVVENAHIIINCLIKLLDYPYK
TLVRETAIQCLVALSELPHGRIYPMRTQVLRAISKSLDDTKRVVRHEAVKCRQTWASMSS
RTLHF
NT seq 3438 nt   +upstreamnt  +downstreamnt
atggcggagaccaccgaattgactcgccacattgagtcctacgtcgacacttcttcttct
tctccctctcttcaggctgcaagcttgaacgctattgcttctctcgttaaaaccgatgtc
ttacctctacaagcactggtcagagagttgggaatgtatctgaccacgacggataacgtt
attcgtgcaagaggaattcttcttctagcagaagtggtcactcgtgttgaatcaaaacct
cttgacagtgcaactatacatagcttggttgggttcttcaaggacagactggcagattgg
agagcagtccgtggtgcacttgtgggttgcttggcattgataaggagaaaaagtgttttg
gggactgtaactagtagtgatgctacagccatttctcagtcttttttccaatacatgcaa
gttcaatctttaggacagtacgacaggaagctatgttttgaactgctggattgcctgcta
gaacattactctgacgcgcttactacactgggagatggccttatatacggagtttgtgaa
gccatagatgcagaaaaggatccagaatgtttaatgcttgcttttcatattgttcagtct
ttggcacaattatatcctgattcatctggtctacttgcaagctttgccaaagacattttt
gatattttagaaccttattttcccattcactttacccatccaactaatggagatactcat
gtgcaaagagatgacctgtcaaggtctctaatgtctgcattctcttctacacctctcttt
gagccatttgtcattcctctgcttcttgagaaactttcttcttcactccattcagcaaag
attgattccttaaagtatcttagagtgtgctcttccaagtatggggcagagagaattgca
aaatatgccaagtctatttggttttcaataaaagacaccctatctacatatttgggggag
ccaaatttttctttaaatatggcacctgttgatggtattggcggtattggcttcccagag
aatgaatttgtgatggaagctctgtccctccttcagcagcttattgttcaaaatggcagt
ttgttaactagcgtaataattgatgatgaggatgtcaacattattttcaacaccatttcc
tcttatgacatatatgacgctattcctgtgcaagaaaagaagaaactgcatgctattggt
cgaattctttatattgcttccaagtctaccatcacttcttgcaatgctgtgtttgaaggt
cttttctccagaatgattgataatttaggagtttctgttagtaatactgatagctctcca
aatggtcatattttcccctctcagaaagtcaagtttggatacctttatctctgcattgaa
ctactggcaggattcagggagttaatcgttgggtctgatgaaccagcattgcagtatgtt
attgatcatgggacatcttgtacttggcttcatagtttttcatcttcattatttaacgac
tttggatcagtcttggcagcaagtgctgacagatgcccccttgatccagatatatacatt
ggagtgaagggcttgcagacacttgctatgtttcattcagaagttttttcactacaaaaa
tcaatatttgataatattttgaagaaatttatgtcaattatcattgaagatttcaacaaa
aaagtattatgggaagcagcattgaaagcattgtgtcatgttggctcctttgttcaagag
tttcacaagtccgaaaaagccatgagctatgggagtttagtagtagaaaaaattgtggaa
cttctgtttcttgatgatattgtggtgcccttttcactcaaagtggaagcattatctaat
ataggcatgactggaatgaaaaatatggtaacatgtcttcaagggatgagaaaagcagta
tttgccaatctatcaaaggtccacacaaatttaaggtcttctgaagttactgttgggctt
ctggaatgctattcttgcaaattgctcccatggatctatgaaaacggaggttcagaggac
tttacagtgcaatttgctatggacatttggagtcaagcaggaaatttcacggttttcagt
acctcatttgaggaaaagggtctccttgatgcattaataaaaaccatgaaactttctgta
gggagttgttctgtggagagccaaaatcttataattcagaaagcttacagtatactatca
tcacgcactaactttcagcttaaagaattggaaagtttaccactatctcctggaaaatac
aacatttcccttactgatgaaaggataatctcattatttgcatccgtggttattgcagtt
tggcccaaaacactcattccaaatatgagagtacttgtgcatctatttatagtaacactc
ctcaggggtattgtcccagttgcacaggcattgggttccatacttaacaaattagtttca
acatccaacagtgcagagaactcctgtggcattaccttggaagaagctctggatgctata
ttcaatacaaagatatggttttctagtattgatatgttgcagagatgtaatggaacaagt
aatgggaaagaaatagttcttactgatatatgcctgggttttgcaaatgataaattgctt
caaatcaatgccatttgtggtctctcgtggataggaaaaggtttacttctacgtggtcat
gaagggattaaagacatcactatgacttttattgagtgcttaataccaggcacaaagagt
gccttgcctttagtgatgaaatctgaagatcagattcaggatcctttagtgatgaaatct
gctgctgatgcttttcatgttctaatgagtgattctgaagtttgtttgaacaaaaaattt
catgccacaatacggcctctgtataagcagcgatttttctcttctatgatgcctatcttt
ctgcagttgattgcaaaagcttactccttatcttcgagatcatttttataccgagctttg
gcacatgtcatgtctgaaactccaatggttgccgtactaaatgatgctaaaaagcttata
cctgttctactggattgtttgtccatgttgacagaagatatccaagataaagatttgctt
tatggtctgttgctagtcttatctgggatattgactgagaaaaatggacaagaagctgtc
gttgagaatgcgcacattatcatcaattgtctgattaagcttctggactacccttataag
acgcttgttcgagagacagctattcaatgtcttgttgccttgtctgagctgccccatggc
agaatctatcctatgaggacacaggttctacgagcaatatctaagtctcttgatgataca
aagagagttgttcgccatgaagctgtcaaatgtcggcaaacatgggcgtcaatgtcatct
aggactcttcatttctga

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