Vigna unguiculata (cowpea): 114185746
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Entry
114185746 CDS
T06017
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun00040
Pentose and glucuronate interconversions
vun01100
Metabolic pathways
Module
vun_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114185746
Enzymes [BR:
vun01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
114185746
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
114185746
NCBI-ProteinID:
XP_027929441
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Position
5:complement(47969625..47973659)
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AA seq
401 aa
AA seq
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MEFLFTVLIILSVLAPGFSSTTTTFNVLKYGAVGDGQTNDSPAFLKAWKDVCQSKSHISQ
LIIPAKRTFMLKPTTFTGPCKSNYTYIQLSGNIVAPKTKPEYSGFHTNTWLGFSFIDGLI
ISGKGSIDGRGSIWWQQPCLGNPQPGRTCRPPTAVTFNRCNRLQLKGYTSINPARSHMTL
TSCQKGTLSFLHLVAPGNSPNTDGIDISGSKHIKVLNSFIATGDDCIAISAGSSNITIFG
ITCGPGHGISIGSLGTRGETDIVEDVHVENCTLTETLTGVRIKTWQGGAGFARRISFEKI
TFVRANNPIIIDQFYCPHRTDCKNKTASIKVSDITYKGIVGTSLTDKAINLSCDENVGCS
NIVLDHIYITSAVPGQKVFSFCHNAHGTATHTKPSVKCLLK
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggagtttttgttcacagtgttgatcattctgagtgttcttgcacccggattcagcagc
acaacaactactttcaatgttttgaaatatggagcagtgggagatggacaaaccaacgat
tctccggcctttctgaaggcatggaaagacgtttgccagagcaagtcacacatatctcaa
ctcatcataccagcaaaacggacattcatgctgaagcctactaccttcactggtccatgc
aaatcaaattacacctacattcagctttcagggaacattgttgcaccaaaaacaaaaccg
gaatattctggattccacacgaatacatggcttggcttctctttcatcgatggtttaatt
atcagtggaaaagggtccattgatggtcgaggctctatctggtggcaacaaccttgctta
ggaaatccacaacctgggagaacgtgccgtccaccaacagcagttacattcaatagatgc
aatcgccttcaactgaaaggttatacaagcattaatcctgcaagaagccacatgactcta
acaagctgccagaaaggcaccctctctttcctgcatttagttgctcctggaaatagccct
aataccgatggcattgatatttctggctctaaacacattaaagtacttaattcttttata
gcaacaggtgatgattgcattgctattagtgctggatcctccaacatcacaatatttggt
ataacatgtggtccaggccatggtatcagcattggatcattgggaacacgtggagagacc
gacattgtcgaggacgtgcatgtggagaattgtactttgactgaaacattaactggtgta
agaatcaagacatggcagggtggtgctggatttgctaggaggatctcgtttgaaaagatt
acgtttgttcgagccaataacccaattatcattgaccagttttattgccctcatagaacg
gattgcaaaaacaagactgcatcaatcaaggtaagtgacataacttacaaagggatcgtt
ggaacatcattgacggacaaagcaatcaacttgagctgtgatgaaaacgtgggatgctcc
aacattgtgcttgatcatatttacataacatctgcagttccagggcagaaagttttctcc
ttttgccataatgcacatggaacagccacccacaccaaaccatccgtgaagtgcttgctg
aagtag
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