Vigna unguiculata (cowpea): 114186108
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Entry
114186108 CDS
T06017
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein MAGPIE
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vun03000
]
114186108
Transcription factors [BR:
vun03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
114186108
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_STOP2_C
zf-met
zf-C2H2_6
zf-C2H2_jaz
zf-MYST
Motif
Other DBs
NCBI-GeneID:
114186108
NCBI-ProteinID:
XP_027929934
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Position
5:40301560..40305237
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AA seq
457 aa
AA seq
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MLQNMDDGEISNAFPLQNPSTAASNQPPVLKRKRNLPGNPDPEAEVIALSPKTLMATNRF
VCEICLKGFQRDQNLQLHRRGHNLPWKLKQRSSKEVRKRVYVCPEKTCVHHHPSRALGDL
TGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITH
RAFCDALAEETARVNAASNISNYSIMQNPLGSNMATHFSSFYKPNSCPEEPVPCNQTSKG
LSLWMSQTSQAHQTIANNNLHEFHQLGSATSPTSIYGGNPLAPCSIPPPSNYQLNWVFGN
KVSPNGSQELSSTASLPLVNNIVKDNPNLQLISVPSLYSSQHQSHQTTSANMSATALLQK
AAQIGTTSSDPSLFLGSIGLKCNSPGQDGNKFCGMYGSSSVLTGHEGENNYSGDLSQMPP
TKRRHVQNEESAWGQTRDFLGVGVPTIYHPSSTNGWT
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgctacaaaacatggatgatggagaaatttcaaatgctttccctcttcagaacccatca
actgctgcatctaaccaacctcctgttttgaagaggaagagaaacctccctggaaatcca
gatcctgaagctgaggtcatagccttatcacccaagaccctgatggccacaaacagattc
gtgtgtgaaatttgtctcaagggtttccaaagggaccaaaaccttcaactccatcgacga
gggcacaaccttccttggaagctgaagcagagatcaagcaaagaagtaaggaagagagtt
tatgtgtgtccagagaagacttgtgtccaccaccacccttcaagggctctgggagactta
actgggattaagaagcacttctgcagaaagcacggtgagaagaagtggaagtgcgagaag
tgctcaaagcgttatgctgtgcagtcagattggaaagctcactcaaaaacatgtggtacc
agagaatacaaatgtgactgtggcactatcttttcacggagggatagtttcatcactcac
agggctttctgcgatgccttagcagaagaaacagctagggtgaacgcagcatcaaacatt
agcaactacagcatcatgcaaaaccctctaggttcaaatatggcaacccatttttcatcg
ttttataagccaaattcgtgccccgaggaaccagtcccatgtaaccaaacatctaagggg
ctatccctttggatgagtcaaacatctcaggctcatcaaacaattgctaacaacaacttg
catgagtttcatcaacttgggtctgccacaagcccaacctcaatttatggtggaaatcca
cttgcaccttgctcaattccaccaccctctaattaccaactaaattgggtgtttggaaat
aaagtgtcccccaatggaagccaagagctaagtagcactgcttcacttccactagtgaac
aatattgttaaggataacccaaacctgcaactcataagtgttccttccttgtatagttca
caacaccaatcccatcaaacaacctcagcgaacatgtcagccacagctttgttgcaaaaa
gctgcacaaattgggacaacttcatcggacccatcattattcctcgggagcataggtttg
aaatgcaacagtccaggccaagatgggaacaaattttgtggtatgtacggttcaagttct
gtgctcacaggtcatgagggagagaataattattccggtgatttgtcacaaatgccccct
acaaaacgacggcacgtacagaatgaagagagtgcatggggacaaactagggattttctt
ggtgttggtgtgccaaccatttaccacccttcatcaaccaacggatggacttaa
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