Vigna unguiculata (cowpea): 114186826
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Entry
114186826 CDS
T06017
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit CG7185
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03015
mRNA surveillance pathway
vun03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114186826
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
114186826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vun03019
]
114186826
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
114186826
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
114186826
NCBI-ProteinID:
XP_027930665
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Position
6:complement(19193827..19198609)
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AA seq
696 aa
AA seq
DB search
MDEGEGGYGESGDPMDQFHRNEAISAVADDGFMAEEDDDYEDLYNDVNVGEGFLQSLRKN
EDSGFRNDDVEEKKPPPPPPPPPVPDAPVVSISGVGDGGEGVGGGGSGIVESRVSGRVDG
FQNQGFRGNEVGAKGGIRVELGHQSVKSDIEEQGGNDGAVLPGIEQQSHGGVVGSVGNEG
LARQGQGGGGGGSANRVGGNGVGNSVGAVNSVSTAGVGGGGGGGGGSGASGGTILFVGDL
HWWTTDAELETELSKYGSVKEVKFFDEKASGKSKGYCQVEFFDPSAATNCKEGMNGHVFN
GRPCVVAFASPFTVKKMGEAQINRNQQMNPSAVTQQGRRGPSDSGAKPGGGNISTGGNYQ
GGDGNRGYGRGGNWGRGNNPGMGNRGPVNPMRNRGGGMGGRGIMGHGGNGFGQGIGGTPP
LLHPQSMMSQGFDPAFGGPMGRMGSYGGFPGAPTPPFSGILPSFPGVGGVGLPGVAPHVN
PAFFGRGMPVNGMGMMPTSGMDGPNMGMWSDPNMGGWGGEEPGGGKAGESSYGEEAASDH
QYGEVSHDRAGWPMREKDRGSERDWSGSSERRYRDDRDQGYERDAPREKDTGHDPEWSER
RHRDDRETGRERSRDRDRERSRDRERDHRERDRHREDRDRYADHHRYRDREAEHDDEWDR
GRSSRTHSKSRLSQEEEHHSRPRDADYGKRRRLTSE
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaggcgagggagggtacggtgagagcggcgatcccatggatcagtttcaccgt
aacgaagctatatccgcagtcgcggacgatggtttcatggcagaggaagatgatgattat
gaagatctttacaacgatgtcaacgtcggagaagggttccttcagtctttgcgcaaaaat
gaggattcgggcttccgaaacgatgatgtcgaggagaagaagcctccgccgcccccgccg
cccccgccagttcctgatgctcccgtggtttcgatttcgggtgttggtgacgggggagag
ggtgtcggaggtggcggaagtgggattgtagagtctagggtttcggggagagttgatgga
tttcagaatcaagggtttagagggaacgaggtgggtgccaaaggtgggatcagggttgaa
ttggggcaccaatctgtgaaatctgatattgaggaacagggtggtaatgacggggctgta
cttccagggattgagcagcagtcacatggcggggttgttgggagtgtgggaaatgagggt
ttagcgagacaaggtcaaggtgggggaggagggggtagtgctaatagggttggtggaaat
ggtgttgggaacagtgtgggcgctgttaatagtgttagtaccgcaggagttggtggtggt
ggtggtggtggcggtggtagtggtgcttccggtggtactatattgtttgttggtgatttg
cattggtggactactgatgctgagctggaaactgagcttagtaagtatggatccgttaag
gaggtgaagtttttcgatgagaaggctagtgggaagtcgaaggggtattgccaagttgag
ttttttgacccttctgctgccacaaattgcaaggagggaatgaatggtcatgtttttaat
gggagaccatgtgttgttgcgtttgcatcaccttttacagttaagaaaatgggggaggct
cagataaacagaaatcagcagatgaacccatctgcagttacacaacagggaagaagggga
ccttctgattcaggggctaagcctggtgggggtaatatttctacaggtggtaattaccaa
ggaggagatgggaatagaggttatgggagaggaggtaattggggaagagggaacaatcct
ggtatggggaatagggggcctgtgaatccaatgaggaataggggtggtgggatgggtggt
agaggtataatgggtcacggtggaaatggttttggacagggtattggtggtacccctccc
ctgttgcatcctcagtcaatgatgagtcagggttttgatcctgcttttggtggtcctatg
ggtagaatgggtagctatggaggctttcctggtgctccaacgcctccattttctgggatc
ttaccatcattccctggtgttggaggtgttggtttgcctggagtagcacctcatgttaat
cctgcattctttggaagggggatgccagttaatggtatggggatgatgcctacatctggc
atggatggtcctaatatggggatgtggtcggatccaaatatgggtggatggggtggggaa
gagcctggtggtgggaaggctggagagtcaagttatggggaggaagctgcatctgaccat
cagtatggtgaagtgagtcatgatagagctggatggcctatgagggagaaagatagaggt
tcagaacgagactggtctggttcttctgagagaaggtatagggatgatagagatcaagga
tatgagagagatgcacctagagagaaagatacgggccatgatcctgagtggtctgaaaga
aggcatcgtgatgatagagaaactggccgagaacggtctcgtgatcgtgaccgtgaacga
tcgcgtgaccgtgaaagggatcatcgtgaacgtgacagacaccgggaagatagggaccgg
tatgcagatcatcataggtatagagatcgggaagcagagcatgatgatgagtgggatagg
ggacgatcatctaggactcacagcaagtcgcggttatcacaagaggaggagcaccattca
aggccaagagatgctgattatgggaagaggcgaaggcttacttctgaataa
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