Vigna unguiculata (cowpea): 114186900
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Entry
114186900 CDS
T06017
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114186900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vun03021
]
114186900
03036 Chromosome and associated proteins [BR:
vun03036
]
114186900
Transcription machinery [BR:
vun03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
114186900
Coactivators
SAGA/TFTC/STAGA complex
114186900
Chromosome and associated proteins [BR:
vun03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
114186900
STAGA complex
114186900
TFTC complex
114186900
SAGA complex
114186900
SLIK complex
114186900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
114186900
NCBI-ProteinID:
XP_027930772
LinkDB
All DBs
Position
6:18183811..18189058
Genome browser
AA seq
535 aa
AA seq
DB search
MSFVPKETIEVIAQSIGITNLSPDVALALAPDLEYRIREIMQESIKCMRHSMRTFLSTED
VDTALALRNLEPIYGFTSNDPPRFKRAAGQKDLFYIDDKDVDIKDLIEAPLPKAPLDTSI
TSHWLAIEGVQPAIPENAPVESSPEIRKSEYKEDGLSVDVKLPVKHLITRELQLYYEKIT
DLTLNKSGSIPFRRALVSLATDSGLHPLVPYFTCFVADEVARNLHNLAVLFALMRLVRSL
VQNSQIHIELYLHQLMPPIITCLVAKRMGSRLSDDHWELRNFSANLVASICQRFGHIYHN
LQPRVTKTFLHSFLDPTKALPQHYGAIKGIEALGSRVIHLLILPNLEPYLHLLEPEMQPD
KQKNEIKRHEAWQVYGALLGAVGKCVHEKVKNFSNLFSPPTRLTSRGSGKAIIPMSGKRK
ASADNLMQQQPPMKKLSTDGHGGVIPMNSMSVDMQGSTGGFSTMMGAPAMSMTRQISTDK
APGKEVVDQRRKVSATLAQAWKDDIDAGNLVSSVVELFGERVLPFVPNPEAFMFL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcgtgccaaaggagacaatcgaagtcatcgcacagagcatcggcatcaccaat
ttgtcccccgatgttgccctcgctctcgcccccgatctcgaatatcgcattcgcgaaatc
atgcaggagtcgataaaatgcatgcgccattcgatgagaacttttcttagtacagaggat
gtagatactgcacttgcacttagaaatttggagccgatatatgggttcacctctaatgat
cctccgaggttcaaaagagctgctggacaaaaggatttgttctacatcgatgacaaagat
gtggatatcaaagatcttattgaagctcctttaccgaaagcaccccttgatacatcaatt
accagtcattggttggctattgaaggtgtgcagcctgcaattcctgaaaacgctccagtt
gaaagctcccctgagataagaaaatctgaatataaggaagatgggctttctgttgatgtt
aaattacctgttaaacatttaataacaagggagcttcagctctactacgaaaaaataact
gacctaacattgaataagtctggatccattccgttcagaagagcattggttagcttggcg
acggactcaggactccatcccttagttccgtatttcacatgttttgttgccgatgaggtg
gcacgcaatttacataatttagctgttttatttgccttgatgcgccttgtgcggagcctt
gtgcaaaattctcagatacacatagaactttatttacatcaattgatgccgcctatcatt
acttgccttgttgcaaaaaggatgggaagcagactatctgacgatcattgggagcttagg
aacttcagtgctaatcttgttgcttcaatatgccaaagatttgggcatatttatcacaat
ctgcagccacgtgtgacaaagacatttcttcattctttcttggaccctacaaaagctctg
cctcagcactatggtgcaattaaagggatagaagctcttggatcaagagtgattcacttg
cttatactcccaaatctcgagccatatttgcatcttcttgagccagaaatgcaacctgat
aaacaaaaaaatgaaataaagaggcatgaagcttggcaggtttatggagctttgttgggt
gcagtaggcaaatgtgtgcatgaaaaggtaaaaaatttcagcaatttgttctctcctcca
actcggcttacttcaagaggcagtggaaaagccattattccaatgtcaggcaaacgaaaa
gccagtgccgacaatctgatgcagcagcaacctccaatgaagaaactttcaacagatggc
catggaggtgtaataccaatgaactccatgtcagttgacatgcaaggctcaacaggggga
ttttccaccatgatgggggctcctgcaatgtcgatgactcgtcaaatttcaaccgacaag
gcaccggggaaggaggttgtagatcaacggaggaaggtgtctgccactcttgctcaggct
tggaaggatgacattgatgcaggaaatttggtgtcatcagtggttgaattgtttggcgaa
agggttttaccatttgttccaaaccctgaagcatttatgtttttgtag
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