| Entry |
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| Name |
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
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| KO |
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| Organism |
vun Vigna unguiculata (cowpea)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:vun00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114187501
09124 Replication and repair
03420 Nucleotide excision repair
114187501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:vun03021]
114187501
03400 DNA repair and recombination proteins [BR:vun03400]
114187501
Enzymes [BR:vun01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
114187501
Transcription machinery [BR:vun03021]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
114187501
DNA repair and recombination proteins [BR:vun03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
114187501
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
6:31671734..31679244
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| AA seq |
1194 aa
MDLEEEQEYDQQMMEEDDDEDDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI
VDESADIEIRPESQHNPGHQSDFAETIYRISFGQIYLSKPMMTESDGETATLFPKAARLR
NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP
PSTMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS
DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV
GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR
DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
FASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV
GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRV
DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKRDIHALQQRESPEDGGWH
DLVSKGFIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASI
IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
QLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG
RPDRTSTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRRDH
SISLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE
DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK
ALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ
PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKN
SFECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLTKEIKSTKDQKKKGA |
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| NT seq |
3585 nt +upstreamnt +downstreamnt
atggatttggaagaggaacaagagtacgatcagcaaatgatggaggaagacgacgacgaa
gacgatatcacgcaagaggatgcgtgggctgtcatctccgcctatttcgaagagaaaggc
ctcgttcgtcagcaactcgattccttcgacgagttcatccaaaacactatgcaggaaatc
gtcgacgaatccgccgacatagaaattcgacccgagtcgcagcataatcccggtcaccaa
tctgatttcgccgagactatttacagaatcagcttcggccagatttacttgagtaagccc
atgatgacggagtctgatggagaaaccgctacgttgtttcccaaggctgctaggttaagg
aacctcacctattcagctcctttgtatgttgatgtctccaaaagggtcatcaagaagggg
cacgatggtgaagaagtcaccgagactcaagatttcactaaagttttcattggcaaggtt
cctataatgcttcggtctagttattgcacgttgtaccagaattcggagaaggatttgact
gaacttggagagtgtccatatgatcaaggcgggtatttcattattaatgggagtgagaag
gttctgattgctcaggagaagatgagcaccaaccatgtctatgttttcaagaagaggcag
cccaacaagtatgcctatgtggctgaagttagatcaatggccgagtctcagaacagaccg
cccagtactatgtttgtgcgcatgctctctcggactagttccaaagggggttcttcagga
caatatatacgtgccacacttccttatattcgaactgaaattcccatcattattgtgttt
cgagcgttggggtttgttgctgacaaagatatacttgaacatatatgctacgatttctca
gatactcaaatgatggagttgcttcgtccttccctagaagaagcgtttgttattcaaaat
caacaagttgcacttgactacattgggaaaagaggtgcaactgttggtgtaaccaaggaa
aagagaattaagtatgctaaggagatcctccaaaaggagatgctccctcatgtgggtgtt
ggagagtattgtgagaccaagaaagcatactattttggttatatcattcaccggctactt
ctttgtgcacttgggcggagggctgaggatgatagggatcattacggcaacaaaaggctg
gatctggctggccctctacttgggggtctttttagaatgttattcagaaagctaacgaga
gatgtcaggggatatgtacagaagtgtgttgataatgggaaagatgttaatctacaattt
gctatcaaagcaaaaaccatcacaagtggacttaaatactcactagctactggtaattgg
ggacaagcaaatgcggcagggaccagagcgggagtttcacaggtgctgaatcgtttaact
tttgcgtcaactttatctcacttgcgaagactaaattccccaataggacgtgaagggaag
ttagctaaaccaagacagctgcataattctcaatggggaatgatgtgtccagcagaaaca
cctgaaggacaagcttgtggacttgtgaagaatctggcattgatggtctacataacagtt
ggttcagcagcatatcctattctggagtttttggaagaatggggcactgagaattttgag
gaaatttctcctgctgtgattccccaagctactaagatttttgtaaatggttgctggatg
ggtatccatcgtgaccctgatatgttggtgagaactttgaggaagttgagacgtcgggtt
gatgttaatactgaagttggggttgtcagagatattcgtcttaaagaattgcgaatatat
actgattatggtcgctgcagtcgtcctttattcattgtggataagcaaaggcttctcata
aagaagagggatattcatgctttacaacagagggaatcccctgaagatggtggatggcat
gacctagtgtccaagggctttatagaatatattgacacagaagaagaagagactacaatg
atttccatgacaattaatgatcttgttcaagctaggctcaacccagaagaggcatattct
gatacatacactcattgtgaaatccacccatctctgattttgggtgtgtgtgcctctatc
ataccatttcccgatcacaatcagtccccacgtaatacttatcagtctgcaatgggaaaa
caagcaatggggatatatgttaccaactaccagtttcgaatggataccttggcctatgtt
ttatattatccacaaaagccactggtcactacaagagcgatggaacatcttcatttccgc
caactccctgctggaattaatgccattgtggcaatttcctgttattctggttacaatcaa
gaagattctgtcatcatgaaccaatcatcaatagaccgtggattctttcgatctcttttt
ttccgatcatatagagatgaagagaagaagatgggaaccctagtcaaagaagactttggc
cgaccagatagaactagcaccatgggcatgagacatggttcttatgataagctggatgat
gatggtcttgcaccaccaggcacacgagtatctggtgaggatgttattattggaaaaacc
accccaatatctcaggaagaggcacaggggcaggctttacgttacacgaggcgtgatcac
agcataagcttacgtcacagtgaaactggaatggttgatcaagttctgctgactacaaat
gctgatggattgagatttgtgaaagtaagagtgagatctgttcgcataccacagattggt
gacaaattcagtagtagacatggtcagaaggggacagttggtatgacttatacacaagag
gacatgccctggactgtggaaggcatcacccctgatattattgtcaatccacatgctatt
ccatcccgaatgacaattggtcagcttattgagtgtatcatgggtaaggtggccgctcac
atgggaaaggaaggagatgcaactccttttacagatgttactgtggacaatatcagcaaa
gctctgcacaaatgtgggtaccaaatgcgtggttttgagactatgtacaatggtcataca
gggagacgtctgagtgcaatgattttccttggtcctacatattaccaaagactgaagcat
atggttgatgacaagatccattctcgtggacgtggtcctgtgcagatcctcacaaggcaa
cctgctgagggacgctcacgcgatggaggtctccgatttggagagatggaacgagactgc
atgattgctcatggagctgctcatttcctaaaggagagattgtttgatcaaagtgatgca
tacagggtccatgtgtgtgagcgctgtgggttgatagccattgcaaatctcaagaagaat
tctttcgagtgcagggggtgcaagaacaaaacggacattgttcaggtttacatcccttac
gcatgtaagttgcttttccaagagttaatggccatggccatagcgccaagaatgcttacg
aaggagatcaaatctacaaaagaccaaaagaagaaaggagcctga |
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