Vigna unguiculata (cowpea): 114187703
Help
Entry
114187703 CDS
T06017
Name
(RefSeq) clathrin heavy chain 2-like
KO
K04646
clathrin heavy chain
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun04142
Lysosome
vun04144
Endocytosis
vun05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114187703
04142 Lysosome
114187703
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
114187703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vun04131
]
114187703
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vun04147
]
114187703
Membrane trafficking [BR:
vun04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
114187703
Exosome [BR:
vun04147
]
Exosomal proteins
Proteins found in most exosomes
114187703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
114187703
NCBI-ProteinID:
XP_027931822
LinkDB
All DBs
Position
6:20955313..20967844
Genome browser
AA seq
1717 aa
AA seq
DB search
MAANAPIAMREALTLGSVGINPQFITFTHVTMESDKYICIRETAPQNSVVMIDMAMPMQP
LRRPITADSALMNPNARILALKAQVPGTSQDHLQVFNIETKAKMKSYQMGQQVVFWKWIT
PKTLGVVTQSSVYHWSIEAEGEPVKVFGRTANLGNNQIINYRCDPTEKWLVLIGIAPGSS
ERPQLVKGNMQLFSVDQQRSQALEAHAAAFATFRVAGNDKDSTLICFASKSINAGQVISK
MHVIELGAQPGKPSFSKKQADLFFPPDFADDFPVSMQISNKYGLIYVITKLGLLFVYDLE
TATAVYRNRISPDPIFLTAEASTSGGFYAINRRGQVLLATVNEATIVPFVSGQLNNLELA
VSLAKRGNLPGAEELVVKRFQELFAQTKYKEAAELAAQSPQGVLRTPDTVAKFQSVPVQA
GQTPPLLQYFGTLLTMGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLVK
TVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYMFLLQTILRTDPQG
AVNFALMMSQMEGGCPIDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGFLQTKVLEI
NLVTFPNVADAILANGMFSHYDRPRIGQLCEKAGLFIRALQHYSELPDIKRVIVNTHAIE
PQALVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQTAKEYSEQLGVDACIKLFEQFKS
YEGLYFFLGAYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEAK
LPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPED
FIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDSN
NNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELVNVTNKNSLFKLQARYV
VERMDSDLWEKVLDPENEFRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIEL
LEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYEE
AFAIFKKFNLNVQAVNVLLDNLQTIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIES
FIRADDSTHFLEVIKAAEDADVYHDMVKYLLMVRQKTKEPKVDSELIYAYAKIDRLGEIE
EFILMPNVANLPNVGDRLYDETLYEAAKIIFAFISNWAKLAVTLVKLKQFQGAVDAARKA
NSSKTWKEVCFACVDAEEFRLAQICGLNVIIQVDDLEEVSEFYQNRGCFNELISLMESGL
GLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLFIQ
YDEFDNAATTVMNHSPEAWDHMQFKDVIVKVASVELYYKAVHFYLQEHPDVINDMLNVIA
LRVDHTRVVDIIRKAGHLRLVKPYMVAVQSNNVSAVNEALNEIYAEEEDYDRLRESIDLH
DNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDCMETCSQSGDR
ELSEDLLIYFIEKGKKECFASCLFVCYDILRPDVALELAWMNNMIDFAFPYLLQFIREYT
SKVDELIRDKIEAQNEEKAKEKEEKDVIAQQNMYAQLLPLALPAPPMPGMSGAYAPSPPP
MPGMGGGYTPTPPPPPMGGMGMPPMPPFGMPPMGGGY
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgaacgcccccatcgccatgcgcgaagccttaacgttgggaagcgtgggcatc
aacccgcagtttatcaccttcacgcacgtcaccatggaatcggacaagtacatttgcatc
agggaaaccgcgccgcagaacagcgtcgtcatgatcgacatggccatgcccatgcaacca
ctccgacgccctatcaccgctgattccgctctcatgaaccctaacgccagaattctcgcg
cttaaagctcaagttcctggcactagtcaggatcatttgcaggtgtttaacattgaaacg
aaagcgaagatgaaatcgtatcaaatgggccaacaggttgtgttttggaagtggataact
ccgaagacattaggcgtagtgactcagtcatctgtgtatcactggtcaattgaagctgag
ggtgagccagtgaaggtgtttggccggacagctaatttggggaataaccagatcatcaac
taccgttgtgatcctactgaaaagtggttggttttgattggaattgcccctggttcttct
gagaggccacaacttgtaaaaggaaatatgcaacttttctctgtggaccaacagcggagc
caggctcttgaagcacatgctgccgcatttgccacatttagagttgctggcaatgataag
gattcaactcttatttgttttgcatccaagagcatcaatgctggacaggttatatcaaag
atgcatgtcattgaacttggcgcccagccaggcaagccatctttttcaaagaaacaagcc
gatctcttctttcctccagactttgctgatgattttcccgtatcaatgcagatttcaaat
aagtatggtttgatatatgttatcacaaaactcggtcttttatttgtctatgatctagag
actgctactgcagtttatagaaatcgaatcagccccgatccaatatttttgacagcagag
gcctcaacatcagggggcttttatgctataaatagacgtggccaggtgttgcttgctact
gtgaatgaagcaaccatagtaccttttgttagtggccagttaaataatttggaacttgct
gttagtcttgctaaaaggggaaacctccctggtgcagaagaattggttgttaagcgtttt
caagaattatttgctcaaaccaagtataaggaagctgcagagcttgctgcacagtcacca
caaggagtacttcgaacgcctgatactgttgctaaatttcagagtgtacctgtgcaagct
gggcaaacgccaccactgttgcaatactttggaactctgttaaccatgggaaaactcaat
gcttttgagtcactggaactgtcacgacttgttgtaaatcagaacaaaaagaatcttttg
gaaaattggctggcagaggataaacttgaatgcagtgaggagcttggtgaccttgtgaag
acggtggataacgacctcgctttgaaaatttatatcaaagctagagcaacaccaaaagtt
gttgcagcttttgcagagaggagagaatttgacaagattctgatatattcaaagcaggtt
ggatatacacctgattatatgttccttcttcaaacaattttacgaacagacccccaggga
gctgtaaattttgctctgatgatgtctcaaatggaaggaggatgccccatagactacaac
acaattacggatctatttcttcagaggaatttgatccgtgaggcaacggcctttttgttg
gatgtgctgaagccaaaccttcctgaacatggatttcttcaaacaaaggttttggaaatt
aatctggtaacctttccaaatgttgctgatgctatattggccaatggcatgttcagtcat
tatgatcgcccacgcattggacaattatgtgaaaaggcaggccttttcattcgggctctt
cagcattattctgagttgccagacatcaaacgtgtcattgtgaatacacatgccattgag
ccgcaggctttagttgagttttttggtaccctttctcgagaatgggcactagagtgtatg
aaagatcttttacttgtgaatctcagaggcaatcttcaaataattgttcagactgctaag
gaatattctgagcagctgggtgttgatgcatgtattaaactatttgagcagttcaaatcc
tatgagggactatactttttcttgggtgcatacttgagctctagtgaggatcctgatatt
cacttcaagtatatcgaggccgctgctaaaactggacaaattaaggaggttgagcgtgta
actagggaatcaaacttttatgatgctgagaagacaaagaattttcttatggaggccaag
cttccggatgcacgaccattgattaatgtctgtgatcgttttggatttgttccggatctc
acccattatctgtatactaacaacatgcttcgatatatcgaaggttatgttcaaaaggtc
aatcctggaaatgctcctctagttgttggacagttgttagatgatgaatgccctgaagat
tttattaaaggtcttatactttccgttcgttctcttctgccagttgagcctttagttgag
gaatgtgagaagaggaatcgtctccgcttgcttactcaattcttggagcatcttgtaagc
gaaggaagccaggatgtgcatgtacataatgctctgggtaaaataattattgacagcaac
aacaatcccgagcattttctcacaaccaatccatactatgattctcgtgttgttggtaaa
tattgtgaaaagcgggatcctacccttgctgttgttgcttacaggagagggcaatgtgat
gacgagctggttaatgttactaataaaaactccttgttcaaactccaagcaagatatgtt
gtggaaaggatggactctgacctctgggagaaagttcttgatcctgagaatgagtttaga
aggcagttgattgatcaagtggtgtccactgctttgcctgaaagcaagagtccagagcaa
gtttcagccgcggtgaaagcttttatgactgctgatcttccacatgagttgatcgagctt
cttgaaaagattgtgctacaaaattctgcttttagtggaaattttaatctgcaaaatttg
ttgattcttactgcaatcaaggcagatccttcaagagttatggattacattaataggttg
gacaactttgatggacctgcagtaggggaggtagctgtggaagcacaactatatgaggag
gcatttgctattttcaagaaatttaatttgaatgttcaggctgttaatgtcctgctggat
aacctccagactattgatcgtgctgtggagtttgctttccgggttgaagaagatgctgtt
tggagccaggttgctaaagcacaacttagggaaggcttagtgagtgatgcaattgagtca
ttcattcgtgcagatgattcaactcatttcttagaggttattaaggctgctgaagatgca
gatgtataccatgacatggtgaagtatcttctcatggttaggcagaagactaaagagccc
aaggtggacagcgagctcatttatgcttatgctaagattgaccgtcttggagaaattgaa
gagtttatactgatgccaaatgttgccaatttaccaaatgttggggaccgcttgtatgat
gagacattgtatgaggctgcaaaaattatatttgcttttatttctaactgggctaagttg
gcagtcacattggtgaagcttaaacagtttcaaggagctgttgatgcagccaggaaagca
aacagttcaaaaacatggaaggaagtctgttttgcctgtgttgatgctgaggaattccgc
ttagctcagatttgtggtctcaatgtcatcattcaggtggatgatttggaggaggttagc
gagttttatcagaacagaggatgcttcaatgaactcatatctctaatggaaagtgggtta
ggattggaacgtgcacatatgggtatctttactgagttgggagttctatatgcaagatat
cgacccgagaagctaatggaacacattaagttgttctcaactcggcttaacattccaaag
cttattcgggcatgtgatgaacagcagcattggaaagaactcacttacctattcattcaa
tatgatgagtttgataatgctgcaaccactgtcatgaatcactctccagaagcatgggac
cacatgcaattcaaagatgttatagttaaagttgcaagtgtagagctctactataaggct
gttcacttctacttacaagagcatccagatgtaataaatgatatgttgaatgtgattgct
cttcgtgtggaccacactcgtgtagtagatataattcggaaggctggccaccttagatta
gttaagccgtacatggttgcagttcaaagcaacaacgtatctgctgtcaatgaagctctg
aatgaaatttatgccgaggaagaggactatgacagacttcgagaatcaatagatctgcat
gacaactttgatcagataggtcttgcacagaagattgagaagcatgaacttcttgagatg
aggcgtgttgctgcatacatttacaagaaagcaggaagatggaagcaatccattgctttg
tcaaagaaagacaatctttacaaggactgcatggaaacatgctctcaatctggtgatcgg
gaactctcagaagatttgcttatctactttattgagaagggaaagaaagagtgttttgca
tcatgcctctttgtctgttatgatattctccggccagatgttgctcttgagctagcttgg
atgaacaacatgattgattttgctttcccatatctcttacagtttattagagagtataca
agcaaggtggatgagcttatcagggacaaaattgaagctcaaaatgaggagaaagctaag
gaaaaggaggagaaggacgtgattgctcaacagaatatgtatgcccagttgctaccactt
gctttgccggcaccaccgatgccaggaatgagtggagcctatgccccttcccctcctcca
atgcctggaatgggtggaggctatactcctacgcctcctccaccacccatgggtggaatg
gggatgccaccaatgcctccttttggcatgcctccaatggggggcggctactaa
DBGET
integrated database retrieval system