Vigna unguiculata (cowpea): 114187836 Help Entry 114187836         CDS       T06017                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism vun  Vigna unguiculata (cowpea) Pathway vun03040   Spliceosome Brite KEGG Orthology (KO) [BR:vun00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     114187836  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:vun03019]     114187836    03041 Spliceosome [BR:vun03041]     114187836 Messenger RNA biogenesis [BR:vun03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      114187836 Spliceosome [BR:vun03041]  Complex B   Other components    Prp19-related factors     114187836  Complex C     114187836 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf TPR_15 Mad3_BUB1_I TPR_19 ARM_TT21 ARM_TT21_C NRDE-2 UTP6_C Motif Other DBs NCBI-GeneID:  114187836 NCBI-ProteinID:  XP_027932014 LinkDB All DBs Position 6:complement(32097452..32103656) Genome browser AA seq 916 aa AA seqDB search MAIPQDLYPSEDDLLYEEEVLRNPFSLKLWWRYLIARSEAPFKKRFVIYERALKALPGSY KLWHAYLRERLDLVRNLPVTHSQYDTLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPSHIEDFIEFL LNSSLWQEASERLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHANEVSGLNVDAIIRGG IRKFTDEVGRLWTSLAEYYIRRGLHEKARDVFEEGMSTVITVRDFSVIFDSYSQFEESML AYKMEEMGLSDEEDDEGEENGLEEVEEEDIRIKGRLVDEDFERKILHGFWLNDKNDIDLR LARFDYLMERRPELANSVLLRQNPHNVEQWHRRVKLFERNPTKQILTYTEAVRTIDPMKA VGKPHTLWVAFAKLYEQHKDLANARVIFDKAVQVNYKTVDNLASVWCEWAEMELKHKNFK GALELMRRATAEPSVEVKRKVAADGNEPVQMKLHKSLRLWTFYVDLEESLGSLESTRAVY ERILDLRIATPQIIINYAYFLEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKR YGKNKLERARELFENAVESAPADQVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNNE KLSMYEIYISRAAEIFGVPKTREIYEQAIESGLPDKDVKTMCLKYAELEKSLGEIDRARG IYVFASQFADPRSDPEFWNKWHEFEVQHGNEDTFREMLRIKRSVSASYSQTHFILPEYLM QKDQTVNLDEAKDKLKQAGIPEDEMAALERQLAPAADNTVTKDRKVGFVSAGVESQSDGG IKTNANHEDIELPEESDSDDDDKIEIAQKDVPSAVFGGLIRKRDEDEKNGEVDAAKDKDN ENRLGALERIKRLKRN NT seq 2751 nt NT seq  +upstreamnt  +downstreamnt atggcgattccgcaagatttgtatccctcagaagacgaccttttgtacgaagaggaggtg cttcgaaatcctttcagtcttaagttatggtggcgttacctaattgcacgttcggaagct ccgttcaagaagcgcttcgtgatttacgagcgggcactgaaggcgcttcccggaagctac aagctgtggcacgcgtacctccgcgagcgcctcgacctcgttcgcaacctccctgtcact cactctcaatacgatacgctcaataatactttcgagcgtgcattagtcaccatgcacaag atgccgcggatttggattatgtatctgcaaaccctaaccaatcagaaattggttactcga actcgcaggaccttcgacagggctctttgcgccctccccgtcacccagcacgaccgtatc tgggaaccttatcttgtgttcgtgagccagaagggtattccaattgagacttctcttcgg gtttatcgcaggtatttgaagtatgacccctctcacattgaggattttattgagtttttg cttaattcgagtctctggcaagaggcttctgagaggctggcttccgtcctcaatgatgac cagttttactccattaagggtaagaccaagcaccggctttggttggagttatgtgatttg ctcacacgccatgccaatgaggtttctgggttgaatgtggacgctatcattaggggtggg attaggaagttcactgatgaggtgggaaggctttggacttcgcttgctgagtattacatt aggaggggtttgcatgagaaggctagggatgtgtttgaggagggtatgtctactgttatc acggtcagggattttagtgttatatttgattcttactcgcagtttgaagaaagcatgctt gcttacaagatggaggagatggggctgagtgatgaagaagatgatgagggtgaggaaaat ggccttgaggaagtggaagaagaggatattcgtattaaaggaagattggtggatgaggat tttgagaggaagattttgcatgggttttggttgaatgacaagaatgacatagacttgagg ttggctcggtttgattaccttatggagaggaggccggaattggctaacagtgtgcttttg cgtcaaaatcctcataatgtagaacagtggcacaggagggtgaagctctttgaaaggaat cctaccaagcagatactgacttacactgaagcggtgaggacgattgatcccatgaaggca gtgggaaagcctcacactttgtgggttgcgtttgctaaattgtatgaacagcacaaagat cttgccaatgcccgtgtcatatttgacaaggcagtgcaggtaaactacaaaactgtggat aacctggctagtgtctggtgtgagtgggctgaaatggagttaaagcataaaaatttcaaa ggagcacttgagctgatgaggcgggctacagctgagccgtcagttgaggtgaagcgaaaa gtggctgcggatgggaatgaaccagtccagatgaagctacataaatccttgagattatgg acgttttatgttgatttggaggaaagcctaggttctttggaatctacacgtgcggtttat gagcgaattttggatttacgaatagccacaccacaaataatcatcaattatgcatacttt ctggaggaacataagtactttgaagatgcttttaaagtttatgaaagaggagtaaagata tttaagtaccctcatgttaaagacatatgggttacttatctctctaaatttgtgaagaga tatggaaagaataaattggaacgagcgagagaattatttgaaaatgcagttgaatcggcc cctgctgatcaagtgaagccactttacctgcaatatgccaagctggaggaggactatggt ctagcgaagcgagctatgaaggtttatgatcaagcaactaaggctgttcctaacaatgag aagttaagcatgtatgagatatacatttctcgtgcagctgagatatttggtgtgcccaaa acaagagagatctatgagcaggcaattgaatctggtcttccagacaaggatgtcaaaacc atgtgtttgaagtatgctgagcttgaaaaaagcttgggagaaattgaccgggcccgtgga atatatgtatttgcgtctcagtttgcagatccacgatctgatcctgagttttggaataag tggcacgagtttgaggttcagcatgggaatgaagatactttcagagaaatgcttcgtatt aagcgaagtgtctctgcaagctacagccagacacattttatactgcccgaatatctaatg cagaaggatcaaactgtgaatcttgatgaagcaaaagacaagttaaaacaggctgggatc cctgaggacgaaatggctgctttagaaaggcaattagcaccagcagctgacaatacagtg acaaaagataggaaagttgggtttgtgagtgctggagtggaatctcagtctgatggaggg ataaaaactaatgcaaatcacgaggatatcgagttaccagaagaaagtgattctgatgat gatgataagattgaaattgcacaaaaagatgttccttctgctgtgtttggtggtttgatt agaaagagagacgaggatgaaaagaatggagaggtagatgcggctaaagataaggacaac gaaaatcggcttggtgctcttgagagaataaagaggctaaaacgaaattag

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